Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HMGN1P7-201ENST00000491722 313 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS8Q8N3P4 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AP005597.4-201ENST00000526762 229 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC135178.6-201ENST00000605314 398 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AC090525.3-201ENST00000605601 189 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 AL162373.1-201ENST00000620433 407 ntBASIC1.85□□□□□ -2.11
VPS8Q8N3P4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS8Q8N3P4 RNU1-93P-201ENST00000364704 169 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.84□□□□□ -2.11
VPS8Q8N3P4 MIR518E-201ENST00000385252 88 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 RNU6-837P-201ENST00000391056 108 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AL513321.1-201ENST00000441175 761 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 RNF2P1-201ENST00000442955 1010 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 Z77249.1-201ENST00000444622 1175 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AL627224.1-201ENST00000448334 444 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 MTCO1P42-201ENST00000457379 726 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC034244.1-201ENST00000507687 207 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC083923.1-201ENST00000523708 376 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC008015.1-201ENST00000555505 465 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC002487.1-201ENST00000604565 994 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 BNIP3P7-201ENST00000605641 516 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC091932.3-201ENST00000624223 323 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 AC027514.1-201ENST00000588561 1603 ntBASIC1.84□□□□□ -2.11
VPS8Q8N3P4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
VPS8Q8N3P4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC015922.2-201ENST00000435593 184 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC105252.1-201ENST00000503089 286 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC108120.2-201ENST00000512973 294 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC107954.1-201ENST00000565906 727 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC107214.2-201ENST00000608204 634 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL133370.2-201ENST00000619934 439 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL133216.2-202ENST00000634512 349 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL356379.1-201ENST00000414105 126 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL121601.2-201ENST00000438019 707 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 ARF4P4-201ENST00000439608 520 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AC020658.4-201ENST00000613987 684 ntBASIC1.83□□□□□ -2.12
VPS8Q8N3P4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.83□□□□□ -2.12
VPS8Q8N3P4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AL022578.1-201ENST00000439330 1433 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VPS8Q8N3P4 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AL023807.1-201ENST00000407932 359 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 RPS12P24-201ENST00000412619 387 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AL136133.1-201ENST00000413694 376 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 MTCO3P12-201ENST00000416718 547 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 TMEM167AP1-201ENST00000423409 219 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 FABP5P3-201ENST00000437960 408 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS8Q8N3P4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS8Q8N3P4 MIR7973-1-201ENST00000614683 76 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AC025016.1-201ENST00000616746 682 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AC011330.2-201ENST00000621680 635 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 AC068620.4-201ENST00000636730 1182 ntBASIC1.82□□□□□ -2.12
VPS8Q8N3P4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 RNU4-51P-201ENST00000364206 140 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 RNU4-91P-201ENST00000364778 135 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 OR1L1-202ENST00000373686 1083 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 MOB1AP2-201ENST00000446060 614 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 RNA5SP233-201ENST00000459153 113 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 EIF4EP3-201ENST00000498782 656 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 AC104685.1-201ENST00000502445 371 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS8Q8N3P4 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 AC118942.1-201ENST00000529674 1035 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 AL354943.1-201ENST00000572103 781 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 AC008749.1-201ENST00000597650 306 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 OR10AB1P-201ENST00000609613 938 ntBASIC1.81□□□□□ -2.12
VPS8Q8N3P4 SNORA3A-201ENST00000364113 130 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS8Q8N3P4 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 AL033519.2-201ENST00000403958 392 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 RPL35AP22-201ENST00000436855 335 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS8Q8N3P4 snoU13.7-201ENST00000459220 104 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 RPL31P41-201ENST00000477967 372 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
VPS8Q8N3P4 AL355812.1-201ENST00000603215 216 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 RMST_5.1-201ENST00000618704 126 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms