Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL138799.3-201ENST00000438968 350 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC016691.1-201ENST00000441321 413 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 CALM1P1-201ENST00000442082 433 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-261P-201ENST00000459506 102 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 VN1R105P-201ENST00000486595 910 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC114786.4-201ENST00000508771 728 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-875P-201ENST00000516488 106 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 MIR2116-201ENST00000517221 80 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC011979.2-201ENST00000527568 352 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 OR8R1P-201ENST00000543943 764 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RPL21P12-201ENST00000559810 515 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC087499.8-201ENST00000578406 226 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RN7SL703P-201ENST00000578485 302 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC105224.1-201ENST00000587055 421 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 UBE2V2P2-201ENST00000587677 504 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 GLUD1P4-201ENST00000590914 418 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL031176.1-201ENST00000604554 466 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL035413.2-201ENST00000604801 525 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL354950.2-201ENST00000617939 290 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL513302.2-201ENST00000562313 1842 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 RNU6-223P-201ENST00000362830 107 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 RNU6-451P-201ENST00000362921 107 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 U3.11-201ENST00000364476 212 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 OR9R1P-201ENST00000412200 877 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 RPS20P5-201ENST00000434808 360 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 MTND4P25-201ENST00000441039 533 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 SNRPGP6-201ENST00000451124 220 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AP000852.1-201ENST00000472460 573 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 RN7SL442P-201ENST00000473804 320 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 LRRC34P2-201ENST00000514850 553 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 SNORA40.12-201ENST00000516329 111 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL133153.1-201ENST00000557756 303 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC136624.4-201ENST00000573044 370 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 FGF7P1-201ENST00000582820 288 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC012669.1-201ENST00000603209 283 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 BNIP3P10-201ENST00000605360 577 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL158211.4-201ENST00000606988 584 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL161637.1-201ENST00000622380 412 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC024940.5-201ENST00000622889 474 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC022140.2-201ENST00000623500 188 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AP003122.6-201ENST00000623831 495 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AL136313.1-201ENST00000624804 202 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP4Q8N3C7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AC244517.1-201ENST00000606030 2086 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AP004289.2-201ENST00000444413 1457 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RNU6-629P-201ENST00000384061 103 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RNU6-1009P-201ENST00000390996 107 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AL136116.1-201ENST00000403591 381 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 TOMM22P1-201ENST00000418578 312 ntBASIC3.37□□□□□ -1.87
CLIP4Q8N3C7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms