Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC245014.2-201ENST00000603689 287 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC246785.4-201ENST00000605374 287 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC012557.2-201ENST00000605919 418 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AL139286.2-201ENST00000606838 396 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC006566.1-201ENST00000608943 513 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AP000254.1-201ENST00000609934 520 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC110801.1-201ENST00000623590 212 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AL136313.1-201ENST00000624804 202 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ZNF807-201ENST00000328088 1707 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL365361.1-201ENST00000566942 3481 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 FRG1CP-201ENST00000358464 769 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 U8.3-201ENST00000363321 132 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 SNORA75-201ENST00000384158 137 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RNU6-297P-201ENST00000384636 107 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 SNORD116-4-201ENST00000384733 96 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 HSPE1P8-201ENST00000406997 288 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RN7SKP111-201ENST00000410349 271 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RNU6-248P-201ENST00000410720 107 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RPL30P2-201ENST00000414021 291 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ZNF885P-201ENST00000420174 1098 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ISCA1P6-201ENST00000427740 390 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 SNRPEP4-201ENST00000435815 279 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL022238.1-201ENST00000442557 355 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 ANP32BP2-201ENST00000454525 545 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RPL31P60-201ENST00000478450 367 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC022447.1-201ENST00000515358 464 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RNA5SP341-201ENST00000516261 117 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC079089.3-201ENST00000603094 673 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 AC104073.3-201ENST00000610942 955 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 CUL1P1-201ENST00000509510 2425 ntBASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HERC6Q8IVU3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 Y_RNA.559-201ENST00000384686 107 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 MIR493-201ENST00000385254 89 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AP000567.1-201ENST00000406413 156 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 FAT1P1-201ENST00000406588 507 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 YPEL5P1-201ENST00000419731 367 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 DLGAP5P1-201ENST00000430307 464 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC009961.2-201ENST00000435771 251 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 RPL21P13-201ENST00000488305 481 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 HMGB3P15-201ENST00000507326 574 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 RNA5SP337-201ENST00000517007 109 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC124947.2-202ENST00000552735 133 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 MIR4528-201ENST00000577763 90 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 MIR4276-201ENST00000584832 70 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC068790.2-201ENST00000602601 557 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.6-201ENST00000603753 252 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.11-201ENST00000604059 253 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AC008162.1-201ENST00000604718 254 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.1-201ENST00000604752 252 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.5-201ENST00000605253 252 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.12-201ENST00000605291 253 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.8-201ENST00000605353 252 ntBASIC3.75□□□□□ -1.81
HERC6Q8IVU3 AL670379.7-201ENST00000605823 252 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms