Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 Y_RNA.5-201ENST00000362334 102 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 SNORD113-7-201ENST00000363762 77 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 SNORA70.2-201ENST00000364506 135 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 Y_RNA.482-201ENST00000384377 111 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 ENSAP1-201ENST00000392855 326 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AL022722.2-201ENST00000402519 180 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RNU6-954P-201ENST00000411355 107 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC069218.2-201ENST00000411665 344 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RPS12P24-201ENST00000412619 387 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC108032.1-201ENST00000416706 207 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 ATG3P1-201ENST00000419507 911 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC018865.2-201ENST00000423631 129 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 OR4C10P-201ENST00000434991 931 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 TXNP1-201ENST00000441872 371 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AL731563.1-201ENST00000442202 214 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 MTND1P17-201ENST00000448961 204 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AL353691.1-201ENST00000451332 387 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC243772.1-201ENST00000451620 410 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RN7SL385P-201ENST00000468873 276 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RPL7P43-201ENST00000478876 753 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC068305.1-201ENST00000497406 726 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 MTND4LP22-201ENST00000508209 276 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 RN7SKP24-201ENST00000515888 284 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RNU6-976P-201ENST00000516086 111 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RNU6-1038P-201ENST00000516516 104 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RNA5SP503-201ENST00000517047 117 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 IGKV2-38-201ENST00000517443 247 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AL137161.1-201ENST00000532231 390 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC024224.1-201ENST00000538284 609 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC069240.1-201ENST00000548774 375 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC025627.2-201ENST00000576220 160 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC110743.1-201ENST00000584870 478 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AF038458.1-201ENST00000588406 262 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 MIR6868-201ENST00000611215 58 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 AL442067.1-201ENST00000613261 223 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 MTND4P1-201ENST00000457501 1466 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 RLIMP1-201ENST00000339626 1680 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK3Q8IV63 Y_RNA.158-201ENST00000363651 101 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 SNORD115-7-201ENST00000365306 82 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 RNU6-1106P-201ENST00000390845 107 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 RN7SKP58-201ENST00000411010 305 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 EIF4A1P3-201ENST00000411521 244 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC068533.1-201ENST00000418542 415 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC009965.2-201ENST00000425328 970 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL031736.2-201ENST00000426573 787 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC091390.1-201ENST00000433904 331 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 RPL21P133-201ENST00000443666 476 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL035666.1-201ENST00000446195 348 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 RPS11P1-201ENST00000451072 473 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 MTCO3P10-201ENST00000455912 772 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL162395.1-201ENST00000457882 422 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 Y_RNA.653-201ENST00000459091 95 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL139099.1-201ENST00000497398 403 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 TRBVA-201ENST00000498804 316 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC079140.5-201ENST00000507882 310 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 RPL39P5-202ENST00000512505 151 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 RN7SKP295-201ENST00000517264 153 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC009902.1-201ENST00000519351 183 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 OR11H5P-201ENST00000554039 926 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 PARP1P2-201ENST00000556806 195 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms