Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.76-201ENST00000362931 109 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RNU6-729P-201ENST00000384399 107 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RNU11-4P-201ENST00000391149 133 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.592-201ENST00000410274 109 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC069213.2-201ENST00000420238 366 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 OR2AM1P-201ENST00000422137 422 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AP000936.3-201ENST00000438127 255 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 DAP3P1-201ENST00000441522 278 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AL513124.1-201ENST00000450410 614 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 snoU13.7-201ENST00000459220 104 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC053481.1-201ENST00000467217 306 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC006511.1-201ENST00000470614 315 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC010631.1-201ENST00000474150 156 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC109925.1-201ENST00000478069 331 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RN7SL319P-201ENST00000480656 221 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC023424.1-201ENST00000496058 459 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 MRPS33P2-201ENST00000507850 322 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RNU6-911P-201ENST00000516523 104 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 RNA5SP392-201ENST00000516905 112 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC100870.1-201ENST00000522035 505 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC092470.1-201ENST00000546187 132 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 MIR3934-201ENST00000579806 107 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC007619.2-201ENST00000605743 379 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 MIR6748-201ENST00000610433 71 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC110801.1-201ENST00000623590 212 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 SMG1P4-204ENST00000523028 4131 ntBASIC4.45□□□□□ -1.7
ATG4DQ86TL0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.45□□□□□ -1.7
ATG4DQ86TL0 INTS6P1-201ENST00000504674 2530 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 Z75746.1-201ENST00000440243 2080 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.8-201ENST00000362353 102 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SNORD81.1-201ENST00000363064 77 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU1-130P-201ENST00000363930 160 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU6-47P-201ENST00000383866 107 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU6-637P-201ENST00000384050 107 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU6-1117P-201ENST00000384525 104 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.541-201ENST00000384640 113 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MIR137-201ENST00000385223 102 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MIR92A2-201ENST00000385299 75 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU6-754P-201ENST00000391166 107 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AL133270.1-201ENST00000402635 279 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RNU2-51P-201ENST00000410708 197 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 TBCAP2-201ENST00000416175 326 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 BX842559.1-201ENST00000419615 532 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 TPT1P13-201ENST00000449760 499 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC008481.1-201ENST00000463278 396 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 ERHP1-201ENST00000523006 310 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MIR4300-201ENST00000581016 96 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AL078605.1-201ENST00000603529 500 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC007998.5-201ENST00000622938 237 ntBASIC4.44□□□□□ -1.7
ATG4DQ86TL0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.44□□□□□ -1.7
ATG4DQ86TL0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms