Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC004024.1-201ENST00000549244 247 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AP001981.2-201ENST00000603241 418 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC108747.1-201ENST00000609508 535 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC103710.1-201ENST00000610003 901 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC245517.5-201ENST00000611529 162 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 AC108479.2-201ENST00000617314 601 ntBASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUP54Q7Z3B4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NUP54Q7Z3B4 RNU1-75P-201ENST00000347264 129 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 SNORA71.3-201ENST00000362582 128 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RNA5SP171-201ENST00000391071 115 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 TXNP7-201ENST00000406296 293 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 FCF1P10-201ENST00000407590 479 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RPL21P24-201ENST00000413752 448 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC012498.1-201ENST00000424037 437 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC005094.1-201ENST00000440420 368 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 TAF9P1-201ENST00000445421 515 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL358232.1-201ENST00000448030 501 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 TAF9P2-201ENST00000454958 515 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RNU7-23P-201ENST00000459465 62 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC008481.1-201ENST00000463278 396 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC004801.2-202ENST00000463559 283 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC105313.1-201ENST00000509121 353 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC117532.1-201ENST00000514638 323 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 Y_RNA.695-201ENST00000516715 107 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AP003467.2-201ENST00000520175 319 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC100870.1-201ENST00000522035 505 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL355836.1-201ENST00000555951 870 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AF038458.1-201ENST00000588406 262 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RNU6-87P-201ENST00000607561 108 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AC239868.4-201ENST00000608318 671 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL391813.2-201ENST00000609113 322 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 BX664608.1-201ENST00000610519 487 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 AL603839.4-201ENST00000624658 1005 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUP54Q7Z3B4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 HMGN1P14-201ENST00000412459 517 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 SEPT2P1-201ENST00000419651 180 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 YME1L1P1-201ENST00000429435 297 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AL159987.2-201ENST00000432754 307 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC091965.2-201ENST00000512324 613 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MTND5P13-201ENST00000513046 1079 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC007458.1-201ENST00000542812 373 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MIR3118-1-201ENST00000581787 76 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 BNIP3P8-201ENST00000597863 560 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC019159.1-201ENST00000605094 187 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC135507.1-201ENST00000607214 561 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MIR92B-201ENST00000607575 96 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms