Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-256P-201ENST00000516747 97 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.718-201ENST00000517110 102 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC067852.3-201ENST00000589177 561 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC023043.2-201ENST00000589678 1026 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 CYP2C61P-201ENST00000604072 290 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 APOOP1-201ENST00000604695 592 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL354984.3-201ENST00000604803 325 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC245389.1-201ENST00000605141 529 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL670379.4-201ENST00000605279 254 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 MIR92B-201ENST00000607575 96 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC015813.4-201ENST00000610469 179 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL158196.1-201ENST00000616786 434 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC008785.1-201ENST00000624475 456 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 SNORD42.2-201ENST00000365570 69 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-190P-201ENST00000384154 102 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-434P-201ENST00000384376 107 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AL360182.1-201ENST00000397433 468 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RPS20P14-201ENST00000412545 360 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AF228730.2-201ENST00000438784 848 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 HMGB3P11-201ENST00000440127 604 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC069285.2-201ENST00000440210 275 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RPS11P1-201ENST00000451072 473 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RNU7-152P-201ENST00000458982 64 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC010469.1-201ENST00000463864 576 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 MTND4P17-201ENST00000470444 350 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 VN1R17P-201ENST00000472048 1090 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-1088P-201ENST00000516850 104 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC135001.1-201ENST00000544546 283 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC020661.2-201ENST00000560114 134 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC106785.1-201ENST00000565935 262 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC104662.1-201ENST00000604448 511 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 U2.17-201ENST00000611454 95 ntBASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RUFY4Q6ZNE9 Z73965.1-201ENST00000623412 2297 ntBASIC4.84□□□□□ -1.64
RUFY4Q6ZNE9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RUFY4Q6ZNE9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RNU1-63P-201ENST00000383902 164 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.422-201ENST00000384054 114 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC097374.1-203ENST00000400783 485 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AL022722.2-201ENST00000402519 180 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RPL37P10-201ENST00000412884 288 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 BRK1P2-201ENST00000442875 223 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 VN1R105P-201ENST00000486595 910 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 HMGB3P15-201ENST00000507326 574 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP446-201ENST00000515955 82 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 SNORA31.3-201ENST00000516029 96 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP49-201ENST00000516450 115 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RN7SKP60-201ENST00000516985 239 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP454-201ENST00000517231 127 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC007151.1-201ENST00000572774 483 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC091178.1-203ENST00000584586 279 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 BDH2P1-201ENST00000602288 736 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AL353748.2-201ENST00000622148 471 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC006065.5-201ENST00000623427 349 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC008013.2-202ENST00000637965 364 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 MIR492-201ENST00000638676 116 ntBASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
RUFY4Q6ZNE9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.82□□□□□ -1.64
RUFY4Q6ZNE9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 266.7 ms