Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MIR183-201ENST00000384958 110 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 Y_RNA.615-201ENST00000410769 117 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 SYF2P2-201ENST00000417620 583 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 DUTP6-201ENST00000425573 462 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC006480.1-201ENST00000449887 378 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 PPIAP3-201ENST00000450588 505 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 BX276092.4-201ENST00000452056 248 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 MTND3P16-201ENST00000452205 344 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 RPL37P6-202ENST00000464216 403 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AC004062.1-201ENST00000509926 645 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT40Q6A162 RN7SKP219-201ENST00000516825 296 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 SCARNA14-201ENST00000516903 136 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AC087241.2-201ENST00000535801 324 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.41□□□□□ -1.7
KRT40Q6A162 COX6CP3-201ENST00000580869 223 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 MIR4742-201ENST00000581069 85 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC010591.1-201ENST00000603941 649 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AL137849.1-201ENST00000604767 169 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 BRDTP1-201ENST00000605735 677 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.41□□□□□ -1.7
KRT40Q6A162 RMST_7.1-201ENST00000621935 268 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 U6.105-201ENST00000637379 88 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
KRT40Q6A162 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT40Q6A162 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KRT40Q6A162 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT40Q6A162 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT40Q6A162 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT40Q6A162 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT40Q6A162 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
KRT40Q6A162 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.4□□□□□ -1.7
KRT40Q6A162 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
KRT40Q6A162 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
KRT40Q6A162 Y_RNA.67-201ENST00000362870 100 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
KRT40Q6A162 SNORA32.2-201ENST00000384049 122 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 Y_RNA.474-201ENST00000384341 102 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 RNU1-89P-201ENST00000384592 164 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 RNVU1-14-201ENST00000384770 164 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 MIR454-201ENST00000390180 115 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 HMGN2P8-201ENST00000391458 268 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 RNU6-193P-201ENST00000410977 107 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 SNORA57.3-201ENST00000411095 141 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 RPL30P3-201ENST00000424262 333 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 MTCYBP6-201ENST00000441810 138 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC092436.1-201ENST00000506450 503 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC005798.1-201ENST00000513715 387 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC114797.1-201ENST00000514003 728 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 GMPSP1-201ENST00000514075 579 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 RNU6-798P-201ENST00000516912 103 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 IGLVIV-53-201ENST00000520107 367 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC022695.1-201ENST00000522089 237 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC022690.1-201ENST00000526681 550 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AC128657.1-201ENST00000549459 145 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AL133153.1-201ENST00000557756 303 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.4□□□□□ -1.71
KRT40Q6A162 MIR3922-201ENST00000585192 84 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AC243960.4-201ENST00000600532 288 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AC007566.2-201ENST00000603642 413 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 RNU6-89P-201ENST00000606519 100 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 uc_338.5-201ENST00000611839 155 ntBASIC4.4□□□□□ -1.71
KRT40Q6A162 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.4□□□□□ -1.71
KRT40Q6A162 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.4□□□□□ -1.71
KRT40Q6A162 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.4□□□□□ -1.71
KRT40Q6A162 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
KRT40Q6A162 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
KRT40Q6A162 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.4□□□□□ -1.71
KRT40Q6A162 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
KRT40Q6A162 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
KRT40Q6A162 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRT40Q6A162 RNA5SP322-201ENST00000363617 119 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 Y_RNA.231-201ENST00000364358 102 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
KRT40Q6A162 RNU6-339P-201ENST00000384310 107 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 SNORD51-201ENST00000384320 80 ntBASIC4.39□□□□□ -1.71
KRT40Q6A162 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms