Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU6-953P-201ENST00000459154 107 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 RNA5SP464-201ENST00000516251 108 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 RNU6-182P-201ENST00000516970 105 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 RN7SL652P-201ENST00000577769 300 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 OR1M4P-201ENST00000589199 287 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC011487.3-201ENST00000593607 453 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 VN1R91P-201ENST00000594377 169 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC010201.1-201ENST00000605051 540 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 MIR6130-201ENST00000619419 109 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 TLK1P1-201ENST00000456760 2440 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 RNU4-78P-201ENST00000410940 126 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC112498.1-201ENST00000444401 332 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AP003733.2-201ENST00000529409 171 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 MIR5692A1-201ENST00000580523 69 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AL031601.2-202ENST00000622650 282 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC130454.1-201ENST00000622948 401 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AL512643.1-201ENST00000635735 524 ntBASIC5.75□□□□□ -1.49
RNF20Q5VTR2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF20Q5VTR2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SNORD27-201ENST00000363981 72 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RNU4-50P-201ENST00000364361 141 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RNU6-596P-201ENST00000365395 98 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RNU6-398P-201ENST00000384143 109 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 Y_RNA.526-201ENST00000384572 110 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 MIR625-201ENST00000385047 85 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 CYB5AP4-201ENST00000396692 399 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RAC1P3-201ENST00000416129 580 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 PRELID3BP1-201ENST00000457142 540 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 snoU13.20-201ENST00000459180 104 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AC022795.1-201ENST00000473808 480 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 TRBVB-201ENST00000477100 408 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RPL7AP6-201ENST00000477943 801 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AC110792.1-201ENST00000491826 472 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 ACA59.1-201ENST00000515966 143 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 RPL23AP87-202ENST00000573039 466 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SNORD91B-202ENST00000608459 222 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AL591516.1-201ENST00000611326 274 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 AL159153.1-201ENST00000619688 317 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 SNORD39.4-201ENST00000620099 78 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 MAPK10-286ENST00000641208 8747 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 INTS6P1-201ENST00000504674 2530 ntBASIC5.74□□□□□ -1.49
RNF20Q5VTR2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RNF20Q5VTR2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AP001273.1-201ENST00000624493 3152 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 Y_RNA.478-201ENST00000384358 107 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 SSXP9-201ENST00000417503 292 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AL137014.1-201ENST00000420490 1226 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AC008065.1-201ENST00000428525 348 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 AL589765.3-201ENST00000446084 462 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 FCF1P4-201ENST00000448326 183 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 RN7SL177P-201ENST00000476596 299 ntBASIC5.73□□□□□ -1.49
RNF20Q5VTR2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF20Q5VTR2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms