Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A4Q53GD3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SLC44A4Q53GD3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 SNORA23-201ENST00000365128 182 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.535-201ENST00000384612 99 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC024082.2-201ENST00000434771 238 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC006026.1-201ENST00000444025 1803 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC016696.1-201ENST00000446949 318 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 DDX10P1-201ENST00000448545 1933 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC140076.1-201ENST00000449897 361 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC008481.1-201ENST00000463278 396 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 HMGB1P41-201ENST00000520234 440 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 HMGN1P28-201ENST00000521340 364 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 CENPUP1-201ENST00000526649 1202 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 HIF1AP1-201ENST00000553642 175 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL359212.1-201ENST00000556608 614 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL138976.2-201ENST00000563989 694 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC010928.3-201ENST00000587712 541 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC098848.2-201ENST00000588023 330 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC044792.1-201ENST00000593294 196 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC093788.1-201ENST00000609356 927 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC032011.1-201ENST00000611703 1549 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 MIR486-1-201ENST00000612171 68 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 AC112487.2-201ENST00000637950 304 ntBASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A4Q53GD3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AL365440.1-201ENST00000436135 2167 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 RNA5SP72-201ENST00000364442 117 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.356-201ENST00000365475 113 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 RNU6-108P-201ENST00000365558 107 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 XGY1-201ENST00000381172 446 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 PTMAP5-201ENST00000393073 333 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC017083.1-201ENST00000428093 483 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 MTCO3P45-201ENST00000443036 613 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 MTCO2P30-201ENST00000503662 364 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC025554.1-201ENST00000505641 188 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 KLHL2P1-201ENST00000508691 521 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 RNU7-143P-201ENST00000516781 65 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 SNORA31.22-201ENST00000517204 135 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC011979.2-201ENST00000527568 352 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC128657.1-201ENST00000549459 145 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 FAM60BP-201ENST00000578364 658 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC105224.1-201ENST00000587055 421 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AF038458.1-201ENST00000588406 262 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 MIR432-201ENST00000606207 94 ntBASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A4Q53GD3 AP003122.6-201ENST00000623831 495 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms