Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL355143.1-201ENST00000407101 841 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC024082.2-201ENST00000434771 238 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AL592447.1-201ENST00000447592 540 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC079776.3-201ENST00000450665 370 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC026410.2-201ENST00000460281 156 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.02□□□□□ -1.93
PTCH1Q13635 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 DEFB130C-202ENST00000530001 230 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 GNAI2P1-201ENST00000541815 315 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC011260.1-201ENST00000578420 472 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 DUXAP11-201ENST00000603858 526 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 BNIP3P31-201ENST00000604515 566 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC245517.5-201ENST00000611529 162 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AL512427.1-201ENST00000618593 349 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC010975.3-201ENST00000618727 978 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AP003476.1-201ENST00000623984 516 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC107982.1-201ENST00000507171 1300 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC008568.2-201ENST00000623862 2313 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 U8.9-201ENST00000365667 134 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTCH1Q13635 AL139156.1-201ENST00000412785 841 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 MTATP6P27-201ENST00000416987 621 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 USP9YP22-201ENST00000438971 294 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC008571.1-201ENST00000467232 300 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC023424.2-201ENST00000493479 777 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCH1Q13635 MTATP6P9-201ENST00000515039 680 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC104986.1-201ENST00000517978 436 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC078814.3-201ENST00000553036 491 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCH1Q13635 HSPE1P3-201ENST00000559254 309 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.02□□□□□ -1.93
PTCH1Q13635 MIR3921-201ENST00000577308 85 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 MIR4637-201ENST00000582405 84 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCH1Q13635 AC068620.3-201ENST00000602749 560 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AC011330.2-201ENST00000621680 635 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AL049777.1-201ENST00000622740 518 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AP003485.1-201ENST00000625093 753 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCH1Q13635 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCH1Q13635 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCH1Q13635 SNRPEP3-201ENST00000338402 276 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCH1Q13635 MIR135A2-201ENST00000384854 100 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 Y_RNA.578-201ENST00000390903 88 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 SNORA48.3-201ENST00000391081 134 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 MTCO1P56-201ENST00000401674 224 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 RNU2-43P-201ENST00000410306 190 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC069282.1-201ENST00000411911 526 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 SPA17P1-201ENST00000416656 452 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCH1Q13635 Z82205.1-201ENST00000428456 297 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AL590233.1-201ENST00000430017 456 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC005297.2-201ENST00000450430 606 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 RPS15AP17-201ENST00000470598 390 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 RPL7P5-201ENST00000471472 736 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC004263.1-201ENST00000479327 332 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 RPL38P4-201ENST00000502376 214 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.01□□□□□ -1.93
PTCH1Q13635 RNU6-1028P-201ENST00000517164 93 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AK6P1-201ENST00000540219 478 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCH1Q13635 GLUD1P4-201ENST00000590914 418 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AC018645.2-201ENST00000609151 472 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AL391834.2-201ENST00000609982 546 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCH1Q13635 OR1S1-201ENST00000624470 978 ntBASIC3.01□□□□□ -1.93
PTCH1Q13635 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCH1Q13635 AC009812.4-201ENST00000569134 1805 ntBASIC3□□□□□ -1.93
PTCH1Q13635 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTCH1Q13635 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3□□□□□ -1.93
PTCH1Q13635 AP000568.1-201ENST00000282964 442 ntBASIC3□□□□□ -1.93
PTCH1Q13635 RNA5SP252-201ENST00000391131 119 ntBASIC3□□□□□ -1.93
PTCH1Q13635 MIR1290-201ENST00000408735 78 ntBASIC3□□□□□ -1.93
PTCH1Q13635 RNU2-42P-201ENST00000410697 113 ntBASIC3□□□□□ -1.93
PTCH1Q13635 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3□□□□□ -1.93
PTCH1Q13635 AL354692.1-201ENST00000423044 315 ntBASIC3□□□□□ -1.93
PTCH1Q13635 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3□□□□□ -1.93
PTCH1Q13635 AL445646.1-201ENST00000431784 216 ntBASIC3□□□□□ -1.93
PTCH1Q13635 NDUFB4P6-201ENST00000436819 366 ntBASIC3□□□□□ -1.93
PTCH1Q13635 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3□□□□□ -1.93
PTCH1Q13635 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PTCH1Q13635 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms