Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXF2Q12947 AC022893.2-201ENST00000564832 3296 ntBASIC3.69□□□□□ -1.82
FOXF2Q12947 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXF2Q12947 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 AL049641.1-201ENST00000441055 1948 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 Z73965.1-201ENST00000623412 2297 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC083843.3-201ENST00000623679 2186 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXF2Q12947 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU6-188P-201ENST00000364207 107 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNA5SP513-201ENST00000364648 118 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 Y_RNA.476-201ENST00000384347 108 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU6-1222P-201ENST00000384615 107 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 Y_RNA.557-201ENST00000384680 107 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 MRPL42P3-201ENST00000401492 326 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU2-47P-201ENST00000410649 186 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNA5SP146-201ENST00000410743 123 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 AL139396.1-201ENST00000421137 167 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC005019.1-201ENST00000436455 431 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AL035666.1-201ENST00000446195 348 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXF2Q12947 SNRPFP3-201ENST00000457792 225 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU7-59P-201ENST00000459101 61 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC108145.1-201ENST00000503770 153 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU6-976P-201ENST00000516086 111 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU6-764P-201ENST00000516396 105 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNA5SP360-201ENST00000516555 118 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNA5SP503-201ENST00000517047 117 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RNU6-64P-201ENST00000517119 105 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AC034105.4-201ENST00000568304 277 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC010653.1-201ENST00000571108 881 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 MIR4703-201ENST00000577728 79 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXF2Q12947 AF038458.1-201ENST00000588406 262 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC093227.2-201ENST00000589357 285 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 NUTF2P8-201ENST00000604593 363 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AL157817.1-201ENST00000614264 790 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AC133104.2-201ENST00000615272 193 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
FOXF2Q12947 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXF2Q12947 FAM91A3P-201ENST00000456826 2544 ntBASIC3.68□□□□□ -1.82
FOXF2Q12947 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXF2Q12947 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
FOXF2Q12947 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXF2Q12947 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
FOXF2Q12947 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXF2Q12947 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXF2Q12947 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXF2Q12947 Y_RNA.167-201ENST00000363735 109 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 SNORD113-7-201ENST00000363762 77 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RNU6-1078P-201ENST00000364522 103 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RNU6-1032P-201ENST00000384100 107 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AL136372.1-201ENST00000403060 228 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
FOXF2Q12947 RPL31P2-201ENST00000413849 377 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 MCFD2P1-201ENST00000417812 300 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AC068533.1-201ENST00000418542 415 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RPL30P3-201ENST00000424262 333 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AL138785.1-201ENST00000425821 331 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AC093106.2-201ENST00000428212 385 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXF2Q12947 AC006011.1-201ENST00000442758 349 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AC104058.1-201ENST00000448028 297 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXF2Q12947 HMGB3P21-201ENST00000452483 547 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AL583843.1-201ENST00000456070 346 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RPL37P6-202ENST00000464216 403 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 HMGB1P30-201ENST00000492455 606 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 Y_RNA.654-201ENST00000497848 106 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 RPS27P27-201ENST00000498779 255 ntBASIC3.67□□□□□ -1.82
FOXF2Q12947 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXF2Q12947 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms