Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDH1Q08174 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH1Q08174 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 SNURFL-201ENST00000309296 343 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 RNU6-770P-201ENST00000363929 105 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 RNU6-806P-201ENST00000365147 105 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 SNORA51.8-201ENST00000384234 132 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 RNU6-171P-201ENST00000384354 107 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 Y_RNA.562-201ENST00000384695 113 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 AL078599.1-201ENST00000402075 293 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 AL513475.1-201ENST00000406602 315 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH1Q08174 RPL26P6-201ENST00000440913 438 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 AL691482.1-201ENST00000453255 87 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 RPL39P38-201ENST00000467018 153 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 BX284632.1-201ENST00000478218 541 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 COX6B1P5-201ENST00000509843 249 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 RNU6-927P-201ENST00000516199 100 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDH1Q08174 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AC090517.1-201ENST00000569307 266 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AL355810.1-201ENST00000614629 552 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 RMST_4.1-201ENST00000616886 107 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH1Q08174 Z99571.1-201ENST00000636677 394 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDH1Q08174 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PCDH1Q08174 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 AC026951.1-201ENST00000559530 2459 ntBASIC4.83□□□□□ -1.64
PCDH1Q08174 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH1Q08174 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH1Q08174 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH1Q08174 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH1Q08174 UBE2L2-201ENST00000254302 429 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH1Q08174 Y_RNA.19-201ENST00000362462 99 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH1Q08174 MTATP6P4-201ENST00000427725 675 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH1Q08174 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 HSPD1P21-201ENST00000436541 245 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDH1Q08174 RN7SL799P-201ENST00000475891 298 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 RN7SL727P-201ENST00000482164 296 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 NDUFB4P9-201ENST00000511646 388 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 RNA5SP43-201ENST00000516559 110 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 Y_RNA.719-201ENST00000517156 106 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDH1Q08174 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AL049839.1-201ENST00000556151 657 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH1Q08174 AC004584.2-201ENST00000570407 410 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 CPDP1-201ENST00000579660 283 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 AC123912.5-201ENST00000605470 343 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 MIR1244-1-201ENST00000612829 85 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 AL591926.8-201ENST00000616876 211 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 AL159153.1-201ENST00000619688 317 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 MIR1244-3-201ENST00000635744 85 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 MIR1244-2-201ENST00000636449 85 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 MIR1244-4-202ENST00000636813 85 ntBASIC4.82□□□□□ -1.64
PCDH1Q08174 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH1Q08174 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDH1Q08174 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH1Q08174 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDH1Q08174 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDH1Q08174 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCDH1Q08174 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH1Q08174 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDH1Q08174 U8.8-201ENST00000365399 135 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 Y_RNA.477-201ENST00000384352 108 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 SAR1AP2-201ENST00000392696 594 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AL591034.2-201ENST00000402839 359 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDH1Q08174 AF186996.5-201ENST00000418098 904 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 AC093414.1-201ENST00000434712 514 ntBASIC4.81□□□□□ -1.64
PCDH1Q08174 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms