Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.65□□□□□ -1.83
SRSF4Q08170 MIR4644-201ENST00000579929 84 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 MIR3149-201ENST00000584629 83 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.65□□□□□ -1.83
SRSF4Q08170 7SK.7-201ENST00000603504 247 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AC110741.2-201ENST00000605278 268 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AC010680.4-201ENST00000605334 543 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 DUSP12P1-201ENST00000612874 516 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AL390240.1-201ENST00000612950 384 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AC098657.3-201ENST00000620434 263 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AC244100.1-202ENST00000621554 382 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 AL136313.1-201ENST00000624804 202 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 Z73965.1-201ENST00000623412 2297 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SRSF4Q08170 ZNF962P-201ENST00000443465 3140 ntBASIC3.65□□□□□ -1.83
SRSF4Q08170 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SRSF4Q08170 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.64□□□□□ -1.83
SRSF4Q08170 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 MTND5P19-201ENST00000424872 1794 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 PHKBP1-201ENST00000450951 1951 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 BDP1P-201ENST00000582658 1990 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC021146.4-201ENST00000309229 279 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 Y_RNA.212-201ENST00000364177 102 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 SNORD115-7-201ENST00000365306 82 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 RNU6-1106P-201ENST00000390845 107 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL139397.2-201ENST00000404529 772 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 RNU6-985P-201ENST00000410182 104 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC018865.2-201ENST00000423631 129 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC127537.2-201ENST00000439258 465 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 MTND1P17-201ENST00000448961 204 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL162591.2-201ENST00000449634 317 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 SNORA84-201ENST00000459229 133 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC022034.3-201ENST00000471393 478 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 Y_RNA.654-201ENST00000497848 106 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 FTH1P24-201ENST00000503502 462 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC108145.1-201ENST00000503770 153 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 RNU6-988P-201ENST00000519081 107 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 MTND4P7-201ENST00000523876 130 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC011979.2-201ENST00000527568 352 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AC110588.1-201ENST00000559699 137 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 COX6CP3-201ENST00000580869 223 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL355598.1-201ENST00000604169 202 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AC104662.1-201ENST00000604448 511 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 uc_338.32-201ENST00000615087 172 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 AP005019.3-201ENST00000620418 560 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 U3.53-201ENST00000628922 216 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 AL451142.2-201ENST00000429076 2090 ntBASIC3.64□□□□□ -1.83
SRSF4Q08170 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.64□□□□□ -1.83
SRSF4Q08170 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SRSF4Q08170 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.64□□□□□ -1.83
SRSF4Q08170 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SRSF4Q08170 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRSF4Q08170 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.63□□□□□ -1.83
SRSF4Q08170 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRSF4Q08170 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SRSF4Q08170 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SRSF4Q08170 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRSF4Q08170 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SRSF4Q08170 SNORA71.2-201ENST00000364941 134 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RNU1-64P-201ENST00000365443 163 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RNU6-61P-201ENST00000365528 109 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 SNORD82-201ENST00000365530 70 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 Y_RNA.401-201ENST00000383965 117 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RNU6-641P-201ENST00000384006 107 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 SDHCP2-201ENST00000398565 501 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 AL138878.1-201ENST00000405131 347 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RN7SKP267-201ENST00000410381 285 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.63□□□□□ -1.83
SRSF4Q08170 OR6C66P-201ENST00000414917 930 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 ARL5AP1-201ENST00000418991 388 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
SRSF4Q08170 AL031736.2-201ENST00000426573 787 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 AL160004.2-201ENST00000432935 350 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 RPS20P1-201ENST00000434853 354 ntBASIC3.63□□□□□ -1.83
SRSF4Q08170 AL353597.2-202ENST00000434901 373 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms