Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-553P-201ENST00000364047 96 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RNA5SP515-201ENST00000364570 118 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RNA5SP479-201ENST00000364858 117 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 MIR1193-201ENST00000408109 78 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RNU2-68P-201ENST00000410878 191 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AC245054.2-201ENST00000415639 319 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RAC1P6-201ENST00000423911 575 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC093151.1-201ENST00000427711 313 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC005300.1-201ENST00000428401 373 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC104332.2-201ENST00000429959 156 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.95□□□□□ -1.94
SCN1BQ07699 ART2BP-201ENST00000453501 499 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RPL31P41-201ENST00000477967 372 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 RPS27AP10-201ENST00000496103 208 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC006499.5-201ENST00000505037 514 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN1BQ07699 RN7SKP18-201ENST00000516005 275 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN1BQ07699 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.95□□□□□ -1.94
SCN1BQ07699 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN1BQ07699 AC025281.1-201ENST00000567026 265 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 MIR3160-1-201ENST00000577972 85 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN1BQ07699 MIR3118-1-201ENST00000581787 76 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN1BQ07699 WISP1-OT1-201ENST00000602893 642 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC006557.5-201ENST00000603126 811 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AC107294.1-201ENST00000609524 467 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AL591516.1-201ENST00000611326 274 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 AP000770.2-201ENST00000623694 100 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCN1BQ07699 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCN1BQ07699 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
SCN1BQ07699 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SCN1BQ07699 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN1BQ07699 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
SCN1BQ07699 RNU6-511P-201ENST00000363496 107 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 SNORD115.1-201ENST00000391109 76 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AL122016.1-201ENST00000403365 367 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC023141.4-201ENST00000412031 328 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 SKA2P1-201ENST00000425592 390 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC093106.2-201ENST00000428212 385 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC092641.1-201ENST00000440229 772 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN1BQ07699 PRDX3P3-201ENST00000447765 522 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AL133217.1-201ENST00000450980 425 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 FABP5P15-201ENST00000453566 214 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 ACTR3P3-201ENST00000480448 893 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN1BQ07699 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC128657.1-201ENST00000549459 145 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC011471.1-201ENST00000585766 187 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AL022161.1-201ENST00000604390 213 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 AC007363.1-201ENST00000604736 620 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC099506.2-201ENST00000623074 221 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN1BQ07699 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN1BQ07699 AC138915.1-201ENST00000565427 1685 ntBASIC2.94□□□□□ -1.94
SCN1BQ07699 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SCN1BQ07699 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SCN1BQ07699 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCN1BQ07699 CR848007.1-201ENST00000442354 1699 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SCN1BQ07699 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AL021407.1-201ENST00000404531 386 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 FCF1P10-201ENST00000407590 479 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 Y_RNA.608-201ENST00000410647 95 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 RNU4-72P-201ENST00000410754 173 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 AC006366.1-201ENST00000422002 759 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AC098614.2-201ENST00000426040 255 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 AL358075.3-201ENST00000426289 226 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 ISCA1P1-201ENST00000426679 387 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 CST9LP2-201ENST00000437612 320 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN1BQ07699 RPS24P13-201ENST00000442520 397 ntBASIC2.93□□□□□ -1.94
SCN1BQ07699 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCN1BQ07699 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms