Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 AC103783.1-201ENST00000520506 373 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AP003385.6-201ENST00000531603 374 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX4Q06945 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 AC015912.2-201ENST00000571053 181 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC104763.2-201ENST00000604179 382 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 AP000756.2-201ENST00000624168 2567 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 THAP12P5-201ENST00000405864 2275 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX4Q06945 AL731532.2-201ENST00000623542 1953 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX4Q06945 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 AL157777.2-201ENST00000258070 137 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-806P-201ENST00000365147 105 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 SNORA62-201ENST00000365493 153 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-1329P-201ENST00000365664 107 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-1093P-201ENST00000391194 107 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-603P-201ENST00000411403 107 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RPL7P2-201ENST00000427639 268 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX4Q06945 PCMTD1P1-201ENST00000455560 355 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RPL23AP31-201ENST00000456160 467 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 FO393415.2-201ENST00000480085 343 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 NIP7P2-201ENST00000485801 544 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-138P-201ENST00000515952 107 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 RNU6-390P-201ENST00000516259 103 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX4Q06945 AC093227.2-201ENST00000589357 285 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 AL034351.1-201ENST00000605288 668 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SOX4Q06945 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SOX4Q06945 MTND5P6-201ENST00000422338 1798 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 AL359893.1-201ENST00000447628 1580 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 BTBD10P1-201ENST00000549824 1352 ntBASIC4.91□□□□□ -1.62
SOX4Q06945 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SOX4Q06945 AC125257.1-201ENST00000560400 2930 ntBASIC4.9□□□□□ -1.62
SOX4Q06945 DHX9P1-201ENST00000436565 3076 ntBASIC4.9□□□□□ -1.62
SOX4Q06945 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SOX4Q06945 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SOX4Q06945 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.9□□□□□ -1.62
SOX4Q06945 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX4Q06945 RNU6-770P-201ENST00000363929 105 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RNU6-200P-201ENST00000364743 107 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RNU6-1303P-201ENST00000364841 107 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 AL138885.1-201ENST00000405921 675 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 AL353997.1-201ENST00000432936 108 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX4Q06945 AC008264.1-201ENST00000447612 367 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 HMGB1P25-201ENST00000468402 607 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 AC018437.1-201ENST00000492214 406 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 HMGB1P35-201ENST00000503360 598 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RNU6-677P-201ENST00000516914 101 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RN7SKP60-201ENST00000516985 239 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 IGLVIV-65-201ENST00000517313 360 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 IGKV2D-23-201ENST00000518179 286 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 RAC1P9-201ENST00000604990 392 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 AC007619.2-201ENST00000605743 379 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX4Q06945 PABPC1P7-201ENST00000413177 1513 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX4Q06945 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX4Q06945 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX4Q06945 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.9□□□□□ -1.63
SOX4Q06945 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
SOX4Q06945 AC027287.1-201ENST00000553115 1453 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SOX4Q06945 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.89□□□□□ -1.63
SOX4Q06945 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
SOX4Q06945 Y_RNA.19-201ENST00000362462 99 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 RNY3P11-201ENST00000364153 102 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 Y_RNA.480-201ENST00000384364 102 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 TMSB10P2-201ENST00000416049 131 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AC099677.1-201ENST00000420575 175 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AL590135.1-201ENST00000422215 156 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AL160275.3-201ENST00000423876 471 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX4Q06945 AL133396.1-201ENST00000432048 687 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.89□□□□□ -1.63
SOX4Q06945 AC011276.1-201ENST00000469688 323 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 RPL31P60-201ENST00000478450 367 ntBASIC4.89□□□□□ -1.63
SOX4Q06945 AC020890.1-201ENST00000491837 504 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms