Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL445529.1-201ENST00000398713 389 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC011233.1-201ENST00000422812 283 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.05□□□□□ -1.92
GABPAQ06546 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.05□□□□□ -1.92
GABPAQ06546 MTCYBP3-201ENST00000445588 1137 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 MTCYBP35-201ENST00000503630 1137 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GABPAQ06546 AC109464.2-201ENST00000510242 943 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL359273.1-201ENST00000510918 627 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.05□□□□□ -1.92
GABPAQ06546 AC022690.1-201ENST00000526681 550 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 LRRC34P1-201ENST00000542742 915 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.05□□□□□ -1.92
GABPAQ06546 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
GABPAQ06546 AC009094.1-201ENST00000564443 426 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC010653.1-201ENST00000571108 881 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 ISCA1P3-201ENST00000577104 373 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL109653.1-201ENST00000603091 248 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL133393.1-201ENST00000603277 287 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AP000811.1-201ENST00000603803 651 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC008962.1-201ENST00000605729 304 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AC068831.7-201ENST00000616954 363 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 MIR6130-201ENST00000619419 109 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AP002791.1-201ENST00000623291 381 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.05□□□□□ -1.92
GABPAQ06546 PCMTD1P7-201ENST00000634506 357 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.05□□□□□ -1.92
GABPAQ06546 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
GABPAQ06546 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
GABPAQ06546 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.04□□□□□ -1.92
GABPAQ06546 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.04□□□□□ -1.92
GABPAQ06546 RNU5A-1-201ENST00000362698 116 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GABPAQ06546 MIR27B-201ENST00000385129 97 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 U3.20-201ENST00000390909 217 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 RAP1BP1-201ENST00000412709 553 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.04□□□□□ -1.92
GABPAQ06546 SDCBPP3-201ENST00000419629 891 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AL139413.1-201ENST00000421309 217 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC012498.1-201ENST00000424037 437 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AL445669.1-201ENST00000426743 755 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 RPL7P36-201ENST00000444633 681 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 RNA5SP310-201ENST00000459084 116 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC091179.1-201ENST00000461606 579 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 RPL7P5-201ENST00000471472 736 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 HSPE1P6-201ENST00000479457 291 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
GABPAQ06546 AC022447.3-201ENST00000506865 495 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.04□□□□□ -1.92
GABPAQ06546 RNU6-798P-201ENST00000516912 103 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 Y_RNA.717-201ENST00000517106 92 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC100870.1-201ENST00000522035 505 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AP004247.1-201ENST00000531556 1289 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC013828.2-201ENST00000532487 235 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GABPAQ06546 SETP2-201ENST00000553886 926 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.04□□□□□ -1.92
GABPAQ06546 AC060771.1-201ENST00000582031 164 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 MIR544B-201ENST00000582372 78 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC106791.2-201ENST00000604680 391 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC018714.1-201ENST00000605028 208 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.04□□□□□ -1.92
GABPAQ06546 AC079597.1-201ENST00000624306 508 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.04□□□□□ -1.92
GABPAQ06546 AC007671.2-201ENST00000637344 619 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.04□□□□□ -1.92
GABPAQ06546 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.04□□□□□ -1.92
GABPAQ06546 AC099063.3-201ENST00000642066 185 ntBASIC3.04□□□□□ -1.92
GABPAQ06546 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.04□□□□□ -1.92
GABPAQ06546 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
GABPAQ06546 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.04□□□□□ -1.92
GABPAQ06546 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.03□□□□□ -1.92
GABPAQ06546 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
GABPAQ06546 RNU5E-8P-201ENST00000363502 116 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
GABPAQ06546 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 AC119751.3-201ENST00000399720 670 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 MIR1305-201ENST00000408300 86 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 RNU6-516P-201ENST00000411381 104 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 NDUFB4P5-201ENST00000415445 361 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.03□□□□□ -1.92
GABPAQ06546 AL593851.1-201ENST00000426171 157 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 UBE2FP3-201ENST00000436366 524 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 RSU1P2-202ENST00000437884 485 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 MTND5P2-201ENST00000442927 1142 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 FAM103A2P-201ENST00000444122 354 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 CACYBPP2-201ENST00000453625 678 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 MTND1P9-201ENST00000453775 944 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 OR6K1P-201ENST00000456766 971 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 AL049714.1-201ENST00000466686 347 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.03□□□□□ -1.92
GABPAQ06546 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.03□□□□□ -1.92
GABPAQ06546 RNU6-678P-201ENST00000516832 109 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 SNORA31.22-201ENST00000517204 135 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 RPL7P20-201ENST00000520308 745 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms