Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 BNIP3P24-201ENST00000593398 557 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AL356280.1-201ENST00000603614 379 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 BNIP3P19-201ENST00000605397 577 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AC004067.1-201ENST00000608733 700 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AC003001.2-201ENST00000616294 831 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 DBF4P1-201ENST00000412976 1892 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HOXC5Q00444 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC5Q00444 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC5Q00444 CCT4P2-201ENST00000233836 1548 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXC5Q00444 SNRPEP2-201ENST00000397592 279 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AL356131.1-201ENST00000405826 414 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 MTND3P20-201ENST00000407663 186 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 BX664727.1-201ENST00000416024 466 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC007742.1-201ENST00000425789 329 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AL356867.1-201ENST00000429623 299 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AL590233.1-201ENST00000430017 456 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 Z98742.2-201ENST00000431564 187 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 MTND2P5-201ENST00000432656 1006 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 ELOCP26-201ENST00000436067 329 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXC5Q00444 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HOXC5Q00444 AC096638.1-201ENST00000444678 216 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 CBWD4P-201ENST00000445695 655 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 MTND2P24-201ENST00000453434 806 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC5Q00444 AC010460.2-201ENST00000509054 677 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC017037.2-201ENST00000513850 890 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 OR5AQ1P-201ENST00000527596 927 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC124947.2-202ENST00000552735 133 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.82□□□□□ -2.12
HOXC5Q00444 AL391261.3-201ENST00000557194 520 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC5Q00444 AC087465.1-201ENST00000560574 245 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 LINC00557-201ENST00000563184 1279 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AL138976.2-201ENST00000563989 694 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC5Q00444 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC5Q00444 AL022067.1-201ENST00000602426 454 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC004853.1-201ENST00000604902 698 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC026741.1-201ENST00000605892 482 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.15-201ENST00000611544 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.16-201ENST00000613119 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.12-201ENST00000613778 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.20-201ENST00000613956 192 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.9-201ENST00000615427 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.11-201ENST00000616345 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.2-201ENST00000616535 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.3-201ENST00000617785 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.19-201ENST00000618602 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 RNU2-1-201ENST00000618664 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.6-201ENST00000619225 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.5-201ENST00000619465 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 U2.10-201ENST00000620268 191 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC004009.2-201ENST00000623016 728 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
HOXC5Q00444 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 AC009902.3-201ENST00000606235 2172 ntBASIC1.82□□□□□ -2.12
HOXC5Q00444 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.81□□□□□ -2.12
HOXC5Q00444 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC5Q00444 RNU6-1066P-201ENST00000363573 105 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HOXC5Q00444 RN7SKP223-201ENST00000410582 62 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 RNA5SP508-201ENST00000411327 119 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC018630.2-202ENST00000422992 927 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC092393.1-201ENST00000439625 742 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AL049734.2-201ENST00000441066 616 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 FAM103A2P-201ENST00000444122 354 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 IFNA11P-201ENST00000446352 526 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXC5Q00444 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC5Q00444 AL353705.4-201ENST00000449661 238 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 SUMO2P2-201ENST00000456482 255 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC078857.1-201ENST00000469870 667 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC105252.1-201ENST00000503089 286 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 KLRA1P-201ENST00000503499 986 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC138853.1-201ENST00000503549 823 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 BOLA3P3-201ENST00000505182 232 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 NDUFB4P2-201ENST00000509515 391 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.81□□□□□ -2.12
HOXC5Q00444 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXC5Q00444 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.81□□□□□ -2.12
HOXC5Q00444 RNU6-1282P-201ENST00000516735 96 ntBASIC1.81□□□□□ -2.12
HOXC5Q00444 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms