Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CENPCP1-201ENST00000533085 2578 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 RNU6-115P-201ENST00000364310 107 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 RPL17P49-201ENST00000443728 411 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 ATG12P2-201ENST00000456830 416 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AC022493.1-201ENST00000492984 337 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 SEM1P1-201ENST00000506694 209 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 SNORD59.2-201ENST00000516873 68 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AL163153.1-201ENST00000554223 283 ntBASIC0.71□□□□□ -2.3
HSPG2P98160 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.7□□□□□ -2.3
HSPG2P98160 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HSPG2P98160 TATDN1P1-201ENST00000414123 891 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AL591212.2-201ENST00000433923 257 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AL139109.1-201ENST00000455491 297 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 RPS15AP34-201ENST00000487776 387 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.7□□□□□ -2.3
HSPG2P98160 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.7□□□□□ -2.3
HSPG2P98160 MIR5194-201ENST00000582634 120 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 DUXAP11-201ENST00000603858 526 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AL031775.1-201ENST00000607014 887 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.7□□□□□ -2.3
HSPG2P98160 XKRY2-202ENST00000623874 1581 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 XKRY-202ENST00000624960 1581 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.7□□□□□ -2.3
HSPG2P98160 RPL5P19-201ENST00000404228 893 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AC007098.1-201ENST00000420122 367 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 PGBD4P3-201ENST00000440731 581 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.7□□□□□ -2.3
HSPG2P98160 RNU6-711P-201ENST00000517255 106 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 EEF1B2P4-201ENST00000551398 348 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.7□□□□□ -2.3
HSPG2P98160 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.7□□□□□ -2.3
HSPG2P98160 RNA5SP189-201ENST00000364920 115 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 RNA5SP331-201ENST00000364986 107 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.7□□□□□ -2.3
HSPG2P98160 PSMA2P3-201ENST00000429685 675 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.7□□□□□ -2.3
HSPG2P98160 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.7□□□□□ -2.3
HSPG2P98160 UBE2FP3-201ENST00000436366 524 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 IPO7P1-201ENST00000442031 636 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 BTF3P12-201ENST00000519620 469 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 HSPE1P20-201ENST00000538133 289 ntBASIC0.7□□□□□ -2.3
HSPG2P98160 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.7□□□□□ -2.3
HSPG2P98160 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.7□□□□□ -2.3
HSPG2P98160 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 MIR1197-201ENST00000408818 88 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 RFESDP1-201ENST00000422350 461 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 Z96811.1-201ENST00000445880 108 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.69□□□□□ -2.3
HSPG2P98160 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.69□□□□□ -2.3
HSPG2P98160 MIR4711-201ENST00000578274 70 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC007275.1-201ENST00000621243 671 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AL136520.1-201ENST00000600311 1322 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 HSPE1P1-201ENST00000421494 318 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 Z85994.2-201ENST00000434327 452 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AL445687.1-201ENST00000439946 251 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AL353718.1-201ENST00000451028 517 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC087808.1-201ENST00000520501 361 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HSPG2P98160 RNU6-670P-201ENST00000364312 104 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 SNORA6-201ENST00000384033 151 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AL030996.1-201ENST00000411430 235 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
HSPG2P98160 AL590233.1-201ENST00000430017 456 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.69□□□□□ -2.3
HSPG2P98160 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.69□□□□□ -2.3
HSPG2P98160 AP005435.4-201ENST00000529514 284 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.69□□□□□ -2.3
HSPG2P98160 AC006270.3-201ENST00000605967 1036 ntBASIC0.69□□□□□ -2.3
HSPG2P98160 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HSPG2P98160 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
HSPG2P98160 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HSPG2P98160 MIR330-201ENST00000362196 94 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AL445183.3-201ENST00000414168 502 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.68□□□□□ -2.3
HSPG2P98160 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC107032.1-201ENST00000485945 480 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 AC123912.5-201ENST00000605470 343 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC112503.2-201ENST00000609005 552 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 RPL31P63-201ENST00000422565 375 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RPL7P34-201ENST00000433316 712 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 MTCO2P9-201ENST00000503214 694 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC093801.2-201ENST00000503966 1050 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.68□□□□□ -2.3
HSPG2P98160 RPS15AP11-201ENST00000594193 385 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 BNIP3P7-201ENST00000605641 516 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 AL157700.1-201ENST00000561973 1432 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RNU6-666P-201ENST00000363499 107 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 SNORA51.2-201ENST00000364595 132 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RNU2-40P-201ENST00000410833 196 ntBASIC0.68□□□□□ -2.3
HSPG2P98160 RNA5SP492-201ENST00000411330 114 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms