Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.76□□□□□ -1.97
IRX3P78415 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.76□□□□□ -1.97
IRX3P78415 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AC112220.2-201ENST00000605513 533 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC024060.1-201ENST00000607052 494 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC025588.4-201ENST00000615802 908 ntBASIC2.76□□□□□ -1.97
IRX3P78415 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
IRX3P78415 AL356585.4-201ENST00000623078 1229 ntBASIC2.76□□□□□ -1.97
IRX3P78415 CDR1-202ENST00000625883 1485 ntBASIC2.76□□□□□ -1.97
IRX3P78415 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
IRX3P78415 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
IRX3P78415 FAM133CP-201ENST00000332869 704 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RNU1-105P-201ENST00000363470 161 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RNU6-224P-201ENST00000384055 107 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RNU4-52P-201ENST00000384209 138 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RNU6-298P-201ENST00000390888 96 ntBASIC2.75□□□□□ -1.97
IRX3P78415 U3.40-201ENST00000408706 208 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC107081.1-201ENST00000414975 361 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.75□□□□□ -1.97
IRX3P78415 AC004866.2-201ENST00000438285 481 ntBASIC2.75□□□□□ -1.97
IRX3P78415 MTND4P6-201ENST00000438297 472 ntBASIC2.75□□□□□ -1.97
IRX3P78415 MTND2P20-201ENST00000440805 661 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RNU7-26P-201ENST00000458980 63 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RPL30P9-201ENST00000465586 330 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC092757.1-201ENST00000467293 467 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RPL31P41-201ENST00000477967 372 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.75□□□□□ -1.97
IRX3P78415 RPS27P21-201ENST00000486977 252 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RPL23AP49-201ENST00000492925 468 ntBASIC2.75□□□□□ -1.97
IRX3P78415 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.75□□□□□ -1.97
IRX3P78415 AC113347.3-201ENST00000509113 148 ntBASIC2.75□□□□□ -1.97
IRX3P78415 BTF3P12-201ENST00000519620 469 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RANP3-201ENST00000530970 276 ntBASIC2.75□□□□□ -1.97
IRX3P78415 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.75□□□□□ -1.97
IRX3P78415 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.75□□□□□ -1.97
IRX3P78415 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.75□□□□□ -1.97
IRX3P78415 YWHAZP1-201ENST00000556286 722 ntBASIC2.75□□□□□ -1.97
IRX3P78415 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.75□□□□□ -1.97
IRX3P78415 MIR3616-201ENST00000584070 92 ntBASIC2.75□□□□□ -1.97
IRX3P78415 BNIP3P31-201ENST00000604515 566 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.75□□□□□ -1.97
IRX3P78415 HMGB1P24-202ENST00000615653 685 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC012640.5-201ENST00000623897 319 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AL109809.4-201ENST00000603520 2185 ntBASIC2.75□□□□□ -1.97
IRX3P78415 AC104454.1-201ENST00000421341 1401 ntBASIC2.75□□□□□ -1.97
IRX3P78415 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.74□□□□□ -1.97
IRX3P78415 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
IRX3P78415 AC069528.2-201ENST00000624849 1991 ntBASIC2.74□□□□□ -1.97
IRX3P78415 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.74□□□□□ -1.97
IRX3P78415 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
IRX3P78415 AC016717.2-201ENST00000609089 5141 ntBASIC2.74□□□□□ -1.97
IRX3P78415 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
IRX3P78415 AL162578.1-201ENST00000406202 378 ntBASIC2.74□□□□□ -1.97
IRX3P78415 MIR1289-2-201ENST00000408360 111 ntBASIC2.74□□□□□ -1.97
IRX3P78415 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.74□□□□□ -1.97
IRX3P78415 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.74□□□□□ -1.97
IRX3P78415 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.74□□□□□ -1.97
IRX3P78415 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.74□□□□□ -1.97
IRX3P78415 AC093155.1-201ENST00000440164 826 ntBASIC2.74□□□□□ -1.97
IRX3P78415 snoU13.23-201ENST00000458863 104 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC090515.1-201ENST00000465295 476 ntBASIC2.74□□□□□ -1.97
IRX3P78415 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.74□□□□□ -1.97
IRX3P78415 NDUFB4P2-201ENST00000509515 391 ntBASIC2.74□□□□□ -1.97
IRX3P78415 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.74□□□□□ -1.97
IRX3P78415 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.74□□□□□ -1.97
IRX3P78415 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.74□□□□□ -1.97
IRX3P78415 MIR4637-201ENST00000582405 84 ntBASIC2.74□□□□□ -1.97
IRX3P78415 MIR3609-201ENST00000582661 80 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC021749.1-201ENST00000604322 607 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC106900.2-201ENST00000604994 317 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC024257.5-201ENST00000612739 531 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC009159.1-201ENST00000618386 642 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC253576.2-201ENST00000618815 580 ntBASIC2.74□□□□□ -1.97
IRX3P78415 U6.101-201ENST00000637707 76 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AC013437.2-201ENST00000639587 677 ntBASIC2.74□□□□□ -1.97
IRX3P78415 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IRX3P78415 AP005901.5-201ENST00000545779 1796 ntBASIC2.74□□□□□ -1.97
IRX3P78415 AP006437.1-201ENST00000641440 3685 ntBASIC2.73□□□□□ -1.97
IRX3P78415 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.73□□□□□ -1.97
IRX3P78415 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IRX3P78415 RPL21P132-201ENST00000331267 462 ntBASIC2.73□□□□□ -1.97
IRX3P78415 SNORA38-201ENST00000363946 132 ntBASIC2.73□□□□□ -1.97
IRX3P78415 AL136372.1-201ENST00000403060 228 ntBASIC2.73□□□□□ -1.97
IRX3P78415 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.73□□□□□ -1.97
IRX3P78415 RN7SKP140-201ENST00000411196 284 ntBASIC2.73□□□□□ -1.97
IRX3P78415 RPS15AP38-201ENST00000413110 372 ntBASIC2.73□□□□□ -1.97
IRX3P78415 MRPS36P1-201ENST00000421291 307 ntBASIC2.73□□□□□ -1.97
IRX3P78415 UBE2V1P13-201ENST00000436983 439 ntBASIC2.73□□□□□ -1.97
IRX3P78415 AC092427.1-201ENST00000439177 601 ntBASIC2.73□□□□□ -1.97
IRX3P78415 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
IRX3P78415 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.73□□□□□ -1.97
IRX3P78415 AL359385.1-201ENST00000456509 365 ntBASIC2.73□□□□□ -1.97
IRX3P78415 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.73□□□□□ -1.97
IRX3P78415 COX7A2P2-201ENST00000505291 250 ntBASIC2.73□□□□□ -1.97
IRX3P78415 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.73□□□□□ -1.97
IRX3P78415 SUMO2P5-201ENST00000506790 245 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms