Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RPS15AP36-201ENST00000492022 382 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.55□□□□□ -1.68
HERVK_113P62684 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 RN7SKP116-201ENST00000516902 319 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 SCARNA14-201ENST00000516903 136 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AP005435.4-201ENST00000529514 284 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AL442663.2-201ENST00000554385 511 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AL121821.2-201ENST00000556081 394 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.55□□□□□ -1.68
HERVK_113P62684 SRGNP1-201ENST00000603392 451 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AC007179.3-201ENST00000604976 235 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.55□□□□□ -1.68
HERVK_113P62684 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.55□□□□□ -1.68
HERVK_113P62684 MIR6715B-201ENST00000637172 77 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 AC074029.4-201ENST00000624796 1859 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HERVK_113P62684 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 MAPK10-372ENST00000641954 3413 ntBASIC4.55□□□□□ -1.68
HERVK_113P62684 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HERVK_113P62684 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
HERVK_113P62684 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERVK_113P62684 MTND4P14-201ENST00000435799 1354 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
HERVK_113P62684 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERVK_113P62684 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERVK_113P62684 FRG1CP-201ENST00000358464 769 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 Y_RNA.394-201ENST00000383942 103 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RNU6-38P-201ENST00000384085 107 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 MIR514A2-201ENST00000385131 88 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 MIR514A3-201ENST00000385132 88 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RNU2-29P-201ENST00000410423 189 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RN7SKP140-201ENST00000411196 284 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 OR6C66P-201ENST00000414917 930 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL354751.2-201ENST00000415471 210 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 NCOR1P3-201ENST00000420479 303 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC005517.2-201ENST00000424673 553 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 MTCO2P12-201ENST00000427426 682 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC093106.2-201ENST00000428212 385 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.54□□□□□ -1.68
HERVK_113P62684 AC005094.1-201ENST00000440420 368 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 AC007967.1-201ENST00000455422 1159 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RNU6-333P-201ENST00000459117 107 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RNU6-329P-201ENST00000459618 107 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 HMGB1P25-201ENST00000468402 607 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RN7SKP256-201ENST00000517201 314 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 RPL7P20-201ENST00000520308 745 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AP003385.6-201ENST00000531603 374 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.54□□□□□ -1.68
HERVK_113P62684 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.54□□□□□ -1.68
HERVK_113P62684 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.54□□□□□ -1.68
HERVK_113P62684 MIR4703-201ENST00000577728 79 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL669831.4-202ENST00000590817 238 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL133255.1-201ENST00000606374 441 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC103710.3-201ENST00000608157 948 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL603758.1-201ENST00000618654 241 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 MIR4727-201ENST00000622232 55 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.54□□□□□ -1.68
HERVK_113P62684 AL645937.1-201ENST00000641739 1652 ntBASIC4.54□□□□□ -1.68
HERVK_113P62684 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
HERVK_113P62684 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HERVK_113P62684 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERVK_113P62684 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HERVK_113P62684 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERVK_113P62684 RNU5E-6P-201ENST00000365574 115 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 Y_RNA.384-201ENST00000383909 102 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC114491.1-201ENST00000416095 246 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AL451054.2-201ENST00000420896 202 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AF228730.4-201ENST00000421457 183 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.53□□□□□ -1.68
HERVK_113P62684 AC005534.2-201ENST00000431047 433 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.53□□□□□ -1.68
HERVK_113P62684 AL118520.1-201ENST00000450770 291 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 SNRPFP3-201ENST00000457792 225 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERVK_113P62684 UBE2CP3-201ENST00000502715 450 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC117522.3-201ENST00000507974 584 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.53□□□□□ -1.68
HERVK_113P62684 Y_RNA.665-201ENST00000516177 98 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 RNU6-1038P-201ENST00000516516 104 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC087369.1-201ENST00000520775 996 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC007991.1-201ENST00000522680 631 ntBASIC4.53□□□□□ -1.68
HERVK_113P62684 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.53□□□□□ -1.68
HERVK_113P62684 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.53□□□□□ -1.68
HERVK_113P62684 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.53□□□□□ -1.68
HERVK_113P62684 MIR4293-201ENST00000584305 78 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms