Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RN7SKP140-201ENST00000411196 284 ntBASIC2.91□□□□□ -1.94
SRP54P61011 UBE2FP1-201ENST00000416536 447 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.91□□□□□ -1.94
SRP54P61011 RPL22P18-201ENST00000417197 377 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.91□□□□□ -1.94
SRP54P61011 AL645937.1-202ENST00000421799 937 ntBASIC2.91□□□□□ -1.94
SRP54P61011 HMGN2P30-201ENST00000423237 256 ntBASIC2.91□□□□□ -1.94
SRP54P61011 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SRP54P61011 SAR1AP4-201ENST00000429225 591 ntBASIC2.91□□□□□ -1.94
SRP54P61011 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.91□□□□□ -1.94
SRP54P61011 UBE2FP3-201ENST00000436366 524 ntBASIC2.91□□□□□ -1.94
SRP54P61011 FAM103A2P-201ENST00000444122 354 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.91□□□□□ -1.94
SRP54P61011 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.91□□□□□ -1.94
SRP54P61011 RPS15AP36-201ENST00000492022 382 ntBASIC2.91□□□□□ -1.94
SRP54P61011 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SRP54P61011 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.91□□□□□ -1.94
SRP54P61011 AC110760.3-202ENST00000515177 371 ntBASIC2.91□□□□□ -1.94
SRP54P61011 ATP5F1P5-201ENST00000526403 760 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.91□□□□□ -1.94
SRP54P61011 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.91□□□□□ -1.94
SRP54P61011 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.91□□□□□ -1.94
SRP54P61011 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.91□□□□□ -1.94
SRP54P61011 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.91□□□□□ -1.94
SRP54P61011 AGGF1P5-201ENST00000567900 919 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AC107952.2-201ENST00000606048 486 ntBASIC2.91□□□□□ -1.94
SRP54P61011 AC004908.2-201ENST00000609090 574 ntBASIC2.91□□□□□ -1.94
SRP54P61011 TUSC7.1-201ENST00000610969 165 ntBASIC2.91□□□□□ -1.94
SRP54P61011 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SRP54P61011 AL139418.1-201ENST00000613613 177 ntBASIC2.91□□□□□ -1.94
SRP54P61011 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.91□□□□□ -1.94
SRP54P61011 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.9□□□□□ -1.94
SRP54P61011 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SRP54P61011 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.94
SRP54P61011 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
SRP54P61011 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SRP54P61011 SNORD113-6-201ENST00000363345 75 ntBASIC2.9□□□□□ -1.95
SRP54P61011 U3.6-201ENST00000363622 211 ntBASIC2.9□□□□□ -1.95
SRP54P61011 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.9□□□□□ -1.95
SRP54P61011 RNU6-217P-201ENST00000384164 104 ntBASIC2.9□□□□□ -1.95
SRP54P61011 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SRP54P61011 RAP1BP1-201ENST00000412709 553 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AC099548.1-201ENST00000421443 426 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.9□□□□□ -1.95
SRP54P61011 ARPC3P1-201ENST00000437218 533 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
SRP54P61011 RPL23AP58-201ENST00000440453 469 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.9□□□□□ -1.95
SRP54P61011 GSTA11P-201ENST00000452866 669 ntBASIC2.9□□□□□ -1.95
SRP54P61011 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.9□□□□□ -1.95
SRP54P61011 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.9□□□□□ -1.95
SRP54P61011 RNU7-23P-201ENST00000459465 62 ntBASIC2.9□□□□□ -1.95
SRP54P61011 MTND4LP3-201ENST00000468320 276 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AC116337.2-201ENST00000477662 156 ntBASIC2.9□□□□□ -1.95
SRP54P61011 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SRP54P61011 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.9□□□□□ -1.95
SRP54P61011 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.9□□□□□ -1.95
SRP54P61011 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
SRP54P61011 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SRP54P61011 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.9□□□□□ -1.95
SRP54P61011 AC087276.1-201ENST00000529659 480 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SRP54P61011 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.9□□□□□ -1.95
SRP54P61011 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.9□□□□□ -1.95
SRP54P61011 AF038458.1-201ENST00000588406 262 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AC002545.1-201ENST00000592511 181 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AL031281.1-201ENST00000604049 488 ntBASIC2.9□□□□□ -1.95
SRP54P61011 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
SRP54P61011 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
SRP54P61011 MIR6852-201ENST00000621699 66 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AC068880.5-201ENST00000624331 290 ntBASIC2.9□□□□□ -1.95
SRP54P61011 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.9□□□□□ -1.95
SRP54P61011 AC110079.1-202ENST00000635213 138 ntBASIC2.9□□□□□ -1.95
SRP54P61011 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SRP54P61011 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.95
SRP54P61011 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 RNU4-28P-201ENST00000364739 141 ntBASIC2.89□□□□□ -1.95
SRP54P61011 RNU6-769P-201ENST00000384407 104 ntBASIC2.89□□□□□ -1.95
SRP54P61011 RPS24P7-201ENST00000416921 246 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AL022400.1-201ENST00000423946 935 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AL445669.1-201ENST00000426743 755 ntBASIC2.89□□□□□ -1.95
SRP54P61011 RPS20P5-201ENST00000434808 360 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AL049734.2-201ENST00000441066 616 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AL135938.1-201ENST00000443141 297 ntBASIC2.89□□□□□ -1.95
SRP54P61011 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.89□□□□□ -1.95
SRP54P61011 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 AC008481.1-201ENST00000463278 396 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.89□□□□□ -1.95
SRP54P61011 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SRP54P61011 OR5BM1P-201ENST00000512021 366 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.89□□□□□ -1.95
SRP54P61011 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AP004247.1-201ENST00000531556 1289 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.89□□□□□ -1.95
SRP54P61011 AL133153.1-201ENST00000557756 303 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.89□□□□□ -1.95
SRP54P61011 AC034105.3-201ENST00000565294 442 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms