Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SNORA48.2-201ENST00000390926 124 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 EI24P2-201ENST00000397776 1076 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AL391417.1-201ENST00000404100 426 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDL3P58872 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDL3P58872 RNU6-953P-201ENST00000459154 107 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.05□□□□□ -1.76
RHBDL3P58872 RN7SL504P-201ENST00000494496 287 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.05□□□□□ -1.76
RHBDL3P58872 NDUFB4P2-201ENST00000509515 391 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 RNU7-51P-201ENST00000516560 62 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 RNU6-928P-201ENST00000516876 104 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 MIR4276-201ENST00000584832 70 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC011471.1-201ENST00000585766 187 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AP000860.1-201ENST00000605250 559 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC008250.2-201ENST00000615261 205 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AL161629.2-201ENST00000615347 275 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AP001506.1-201ENST00000615444 211 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC022079.1-201ENST00000621546 602 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 AC026422.1-201ENST00000623961 452 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDL3P58872 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDL3P58872 Z83843.1-201ENST00000604070 3685 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDL3P58872 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RHBDL3P58872 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RHBDL3P58872 RNU6-1167P-201ENST00000363227 94 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RNU6-799P-201ENST00000363567 107 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RNA5SP139-201ENST00000364340 117 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RNU6-198P-201ENST00000384258 104 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RNU6-817P-201ENST00000391083 104 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RPL23AP32-201ENST00000395315 459 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AL357075.1-201ENST00000404107 726 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RPS3AP3-201ENST00000411933 242 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 HSPE1P1-201ENST00000421494 318 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AC104651.1-201ENST00000427559 735 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 USP9YP15-201ENST00000442391 422 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDL3P58872 RPL31P3-201ENST00000458430 332 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 snoU13.28-201ENST00000459235 104 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AC104472.2-201ENST00000469035 601 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 RNA5SP337-201ENST00000517007 109 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AP002453.2-201ENST00000533503 320 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.04□□□□□ -1.76
RHBDL3P58872 MIR5680-201ENST00000577577 84 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.04□□□□□ -1.76
RHBDL3P58872 NRBF2P1-201ENST00000587407 859 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 HMGN1P30-201ENST00000589286 268 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 DUXAP4-201ENST00000603046 613 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AC022149.2-201ENST00000621061 203 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AL603839.4-201ENST00000624658 1005 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RHBDL3P58872 AC006504.1-201ENST00000562493 3666 ntBASIC4.04□□□□□ -1.76
RHBDL3P58872 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RHBDL3P58872 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHBDL3P58872 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
RHBDL3P58872 MTND5P29-201ENST00000458676 1807 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC010680.1-201ENST00000590024 3590 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDL3P58872 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 RNU6-1027P-201ENST00000383998 107 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 RNU6-140P-201ENST00000384566 108 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHBDL3P58872 SNORA40.3-201ENST00000390964 122 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AC063979.1-201ENST00000415539 377 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 BTF3L4P3-201ENST00000418879 476 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AL589872.1-201ENST00000426602 288 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 MTND1P28-201ENST00000435623 950 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 MTND6P13-201ENST00000443510 523 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 MTND2P4-201ENST00000445034 1004 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC010468.1-201ENST00000461022 817 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
RHBDL3P58872 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDL3P58872 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDL3P58872 SNORA31.3-201ENST00000516029 96 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms