Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL161912.2-201ENST00000565707 3007 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN20P56880 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN20P56880 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 SNORA71.3-201ENST00000362582 128 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RNU6-1097P-201ENST00000363586 107 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 HSPE1P26-201ENST00000405341 275 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RNA5SP31-201ENST00000411144 127 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 RPS29P4-201ENST00000414733 161 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN20P56880 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC008850.1-201ENST00000427546 362 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC073464.1-201ENST00000429823 534 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 HMGN2P31-201ENST00000432430 273 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AL451074.3-201ENST00000437709 472 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLDN20P56880 GAPDHP27-201ENST00000447427 1020 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 SNRPGP3-201ENST00000469405 227 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN20P56880 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 AC007182.2-201ENST00000489251 402 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC023194.1-201ENST00000493084 308 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 GMPSP1-201ENST00000514075 579 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 RNU7-51P-201ENST00000516560 62 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RNU6-1220P-201ENST00000517126 108 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC090572.1-201ENST00000519251 160 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 IGKV2D-19-201ENST00000523346 262 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN20P56880 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN20P56880 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 ARL2BPP2-201ENST00000550907 489 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 MIR3921-201ENST00000577308 85 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN20P56880 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 BDH2P1-201ENST00000602288 736 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC006077.1-201ENST00000604746 343 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AL136363.1-201ENST00000605349 337 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC103710.3-201ENST00000608157 948 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 SDR42E1P2-201ENST00000614861 481 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AL158209.2-201ENST00000619266 216 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC026585.1-201ENST00000619582 524 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC110801.1-201ENST00000623590 212 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 AC124864.2-201ENST00000624736 186 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN20P56880 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN20P56880 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN20P56880 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN20P56880 AF127577.6-201ENST00000623352 2191 ntBASIC3.24□□□□□ -1.89
CLDN20P56880 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 AC027514.1-201ENST00000588561 1603 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 RNU6-50P-201ENST00000362356 103 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNU6-108P-201ENST00000365558 107 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNU1-39P-201ENST00000383897 165 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 MIR449B-201ENST00000384995 97 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 MTHFD2P2-201ENST00000407725 247 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNU2-36P-201ENST00000410361 191 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNU4-55P-201ENST00000410731 137 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AC017079.2-201ENST00000416102 485 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AC018630.2-202ENST00000422992 927 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 OR2AS1P-201ENST00000427827 319 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 GPR143P-201ENST00000434155 205 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 SNORD105B-201ENST00000458770 79 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RPL23AP62-201ENST00000463396 453 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 AL359273.1-201ENST00000510918 627 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 RN7SKP13-201ENST00000515933 244 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNU6-390P-201ENST00000516259 103 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RNA5SP468-201ENST00000516782 93 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN20P56880 FAM92A1P1-201ENST00000528023 890 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN20P56880 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN20P56880 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN20P56880 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN20P56880 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN20P56880 ZNF192P1-203ENST00000565888 810 ntBASIC3.23□□□□□ -1.89
CLDN20P56880 RPL23AP84-201ENST00000571193 464 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms