Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 BTBD10P1-201ENST00000549824 1352 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.54□□□□□ -1.36
PRIM1P49642 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PRIM1P49642 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PRIM1P49642 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.53□□□□□ -1.36
PRIM1P49642 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.53□□□□□ -1.36
PRIM1P49642 AC007785.2-201ENST00000598627 1916 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC092681.1-201ENST00000297369 291 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC019155.1-201ENST00000382242 574 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 RNU6-1117P-201ENST00000384525 104 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.53□□□□□ -1.36
PRIM1P49642 REREP1Y-201ENST00000422655 198 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC092573.2-201ENST00000434546 243 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC007389.2-201ENST00000434630 306 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC005154.2-201ENST00000438110 379 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 REREP2Y-201ENST00000439103 200 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.53□□□□□ -1.36
PRIM1P49642 AL356981.1-201ENST00000454879 684 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AURKAPS2-201ENST00000454983 333 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC109925.1-201ENST00000478069 331 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC022133.1-201ENST00000490961 571 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 Y_RNA.662-201ENST00000516028 97 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AF186190.1-201ENST00000517470 480 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.53□□□□□ -1.36
PRIM1P49642 AL590705.4-201ENST00000532209 134 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 RN7SL690P-201ENST00000582087 240 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
PRIM1P49642 AC097063.1-201ENST00000426714 1797 ntBASIC6.53□□□□□ -1.36
PRIM1P49642 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
PRIM1P49642 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.53□□□□□ -1.36
PRIM1P49642 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PRIM1P49642 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PRIM1P49642 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PRIM1P49642 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PRIM1P49642 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
PRIM1P49642 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.52□□□□□ -1.36
PRIM1P49642 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRIM1P49642 SCARNA15-201ENST00000607520 4325 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRIM1P49642 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PRIM1P49642 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PRIM1P49642 Y_RNA.170-201ENST00000363746 110 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AL096701.2-201ENST00000416920 238 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AL391219.1-201ENST00000422570 483 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 TMEM167AP1-201ENST00000423409 219 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.52□□□□□ -1.37
PRIM1P49642 BX276092.4-201ENST00000452056 248 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 RPL23AP56-201ENST00000460778 453 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AC010683.1-201ENST00000473673 378 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AC074140.1-201ENST00000621617 208 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AC097372.5-201ENST00000623665 376 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AC073136.1-201ENST00000449426 2884 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 FAM91A3P-201ENST00000456826 2544 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AC139713.2-214ENST00000642059 1811 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRIM1P49642 RLIMP1-201ENST00000339626 1680 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PRIM1P49642 AL138820.1-201ENST00000617901 5305 ntBASIC6.52□□□□□ -1.37
PRIM1P49642 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PRIM1P49642 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PRIM1P49642 AP001148.1-201ENST00000624124 2359 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 RN7SKP153-201ENST00000365026 316 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 RNU6-708P-201ENST00000384217 107 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 MIR578-201ENST00000384828 96 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 MIR521-1-201ENST00000384902 87 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 SNORA77-201ENST00000408716 125 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 RPL19P1-201ENST00000411635 428 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.51□□□□□ -1.37
PRIM1P49642 CYCSP33-201ENST00000414485 327 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.51□□□□□ -1.37
PRIM1P49642 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.51□□□□□ -1.37
PRIM1P49642 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.51□□□□□ -1.37
PRIM1P49642 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.51□□□□□ -1.37
PRIM1P49642 AC004938.1-201ENST00000438468 308 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.51□□□□□ -1.37
PRIM1P49642 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.51□□□□□ -1.37
PRIM1P49642 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.51□□□□□ -1.37
PRIM1P49642 RNU6-861P-201ENST00000516745 106 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 AC136932.1-201ENST00000574771 208 ntBASIC6.51□□□□□ -1.37
PRIM1P49642 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.51□□□□□ -1.37
PRIM1P49642 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PRIM1P49642 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 ADAM5-202ENST00000399789 1942 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 AC139769.1-204ENST00000472297 1931 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms