Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL12P48061 UBE2V1P12-201ENST00000503954 474 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 SEM1P1-201ENST00000506694 209 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC009901.1-201ENST00000506703 541 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC006499.2-201ENST00000513470 337 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC093677.1-201ENST00000514414 678 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL12P48061 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CXCL12P48061 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.29□□□□□ -2.04
CXCL12P48061 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.29□□□□□ -2.04
CXCL12P48061 AL390208.1-201ENST00000605885 644 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC131235.4-201ENST00000609288 620 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC106028.5-201ENST00000610332 395 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC107871.2-201ENST00000612894 502 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 AC107075.1-201ENST00000613695 314 ntBASIC2.29□□□□□ -2.04
CXCL12P48061 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.29□□□□□ -2.04
CXCL12P48061 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.29□□□□□ -2.04
CXCL12P48061 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
CXCL12P48061 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CXCL12P48061 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.29□□□□□ -2.04
CXCL12P48061 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CXCL12P48061 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL12P48061 Y_RNA.192-201ENST00000363977 102 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RNU4-68P-201ENST00000364314 141 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CXCL12P48061 SNORA67.3-201ENST00000384366 140 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RNU6-882P-201ENST00000391025 103 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RNU6-1242P-201ENST00000391052 103 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 FO393413.1-201ENST00000402892 195 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AL136372.1-201ENST00000403060 228 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 HMGB1P17-201ENST00000403495 628 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RNA5SP247-201ENST00000411181 105 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RPS15AP38-201ENST00000413110 372 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AL592310.1-201ENST00000414330 671 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL12P48061 TIMM9P2-201ENST00000419324 266 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL12P48061 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL12P48061 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL12P48061 AC004866.2-201ENST00000438285 481 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC004854.1-201ENST00000440356 349 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL12P48061 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL12P48061 ZNF886P-201ENST00000450781 723 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 MTCO3P11-201ENST00000455103 774 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.28□□□□□ -2.04
CXCL12P48061 RNU7-136P-201ENST00000458819 69 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC072039.1-201ENST00000477611 581 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 LINC00888-204ENST00000487386 421 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC134050.1-201ENST00000495088 933 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL12P48061 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.28□□□□□ -2.04
CXCL12P48061 RNA5SP76-201ENST00000516277 87 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL12P48061 AL512347.1-201ENST00000566420 503 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC135628.1-201ENST00000568867 534 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AP001269.3-201ENST00000588718 329 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 DUXAP11-201ENST00000603858 526 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC004853.1-201ENST00000604902 698 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC019159.1-201ENST00000605094 187 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC092953.2-201ENST00000608000 699 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 BX664608.1-201ENST00000610519 487 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 AC002064.3-201ENST00000623448 346 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.28□□□□□ -2.04
CXCL12P48061 AC231657.1-201ENST00000624313 397 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 MIR6733-201ENST00000635723 61 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CXCL12P48061 MTND5P29-201ENST00000458676 1807 ntBASIC2.28□□□□□ -2.04
CXCL12P48061 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CXCL12P48061 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.28□□□□□ -2.05
CXCL12P48061 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL12P48061 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CXCL12P48061 AL022578.1-201ENST00000439330 1433 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 RNU6-799P-201ENST00000363567 107 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 RNU6-343P-201ENST00000364709 104 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 RNA5SP88-201ENST00000365560 109 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 Y_RNA.548-201ENST00000384656 105 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 MIR181B1-201ENST00000385240 110 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 RNU6-952P-201ENST00000391164 108 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 RPL23AP29-201ENST00000397284 453 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AL590004.2-201ENST00000404787 371 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 TPMTP2-201ENST00000414372 726 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 MORF4L1P6-201ENST00000418771 268 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.27□□□□□ -2.05
CXCL12P48061 AL139421.1-201ENST00000423010 169 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AC092648.1-201ENST00000425870 423 ntBASIC2.27□□□□□ -2.05
CXCL12P48061 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms