Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL37P21-201ENST00000435890 276 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 MTND1P30-201ENST00000441241 901 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 UBE2D3P4-201ENST00000441973 436 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 ST13P20-201ENST00000447996 1065 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.11□□□□□ -1.91
NEDD4P46934 AC133134.1-201ENST00000466800 359 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 SETP11-201ENST00000473027 690 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 RPL23AP11-201ENST00000475260 469 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AP003497.1-201ENST00000528472 562 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.11□□□□□ -1.91
NEDD4P46934 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.11□□□□□ -1.91
NEDD4P46934 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.11□□□□□ -1.91
NEDD4P46934 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 MIR4307-201ENST00000582802 84 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 MIR4672-201ENST00000583126 81 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 MIR4298-201ENST00000584380 73 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC023043.3-201ENST00000593113 385 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NEDD4P46934 AC103710.4-201ENST00000609301 899 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC007998.5-201ENST00000622938 237 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AL356266.1-201ENST00000623311 483 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC079597.1-201ENST00000624306 508 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 AC007494.3-201ENST00000624660 743 ntBASIC3.11□□□□□ -1.91
NEDD4P46934 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NEDD4P46934 MAPK10-362ENST00000641864 4484 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 AL161431.1-201ENST00000618966 4205 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC012321.1-201ENST00000561622 1588 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 U3.20-201ENST00000390909 217 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AL139039.1-201ENST00000401900 692 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 RNA5SP184-201ENST00000411071 108 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 TPMTP3-201ENST00000411928 735 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 MTND1P21-201ENST00000412991 285 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD4P46934 MRPL50P2-201ENST00000416821 482 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 AL445669.1-201ENST00000426743 755 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD4P46934 AL365184.2-201ENST00000431139 435 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC109583.1-201ENST00000432156 268 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.1□□□□□ -1.91
NEDD4P46934 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD4P46934 FAM103A2P-201ENST00000444122 354 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 RPL7P36-201ENST00000444633 681 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AP1S2P1-201ENST00000457344 379 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 MTND3P7-201ENST00000474435 343 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AL024509.2-201ENST00000493462 493 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD4P46934 KLHL2P1-201ENST00000508691 521 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD4P46934 AC004062.1-201ENST00000509926 645 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 RNU6-528P-201ENST00000516926 100 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC090136.1-201ENST00000520009 240 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC087373.1-201ENST00000524920 491 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.1□□□□□ -1.91
NEDD4P46934 AC011260.1-201ENST00000578420 472 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC105129.3-201ENST00000605455 485 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC092354.1-201ENST00000606057 376 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC097065.2-201ENST00000608159 533 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC004908.3-201ENST00000610248 625 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AL360181.4-201ENST00000621752 134 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC005858.4-201ENST00000623191 700 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AC091965.5-201ENST00000624785 342 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.1□□□□□ -1.91
NEDD4P46934 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NEDD4P46934 AF127577.6-201ENST00000623352 2191 ntBASIC3.1□□□□□ -1.91
NEDD4P46934 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NEDD4P46934 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.09□□□□□ -1.91
NEDD4P46934 AC009902.3-201ENST00000606235 2172 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 MTCO1P9-201ENST00000505577 1534 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 MIR135A2-201ENST00000384854 100 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 SNORA48.8-201ENST00000391324 134 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 RNU2-37P-201ENST00000410695 177 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 RNU2-71P-201ENST00000411395 189 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 MTCO1P39-201ENST00000426148 480 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.09□□□□□ -1.91
NEDD4P46934 BMI1P1-201ENST00000445879 941 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 RPL36AP33-201ENST00000450395 310 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 ZNF114P1-201ENST00000453500 292 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 AC234775.1-201ENST00000454247 670 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
NEDD4P46934 AC109486.1-201ENST00000486833 374 ntBASIC3.09□□□□□ -1.91
NEDD4P46934 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.09□□□□□ -1.91
NEDD4P46934 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms