Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.68□□□□□ -1.98
SSR1P43307 AC034159.1-201ENST00000513885 583 ntBASIC2.68□□□□□ -1.98
SSR1P43307 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.68□□□□□ -1.98
SSR1P43307 OR6C7P-201ENST00000547875 934 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.68□□□□□ -1.98
SSR1P43307 GTF3AP2-201ENST00000557014 266 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.68□□□□□ -1.98
SSR1P43307 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.68□□□□□ -1.98
SSR1P43307 MIR3921-201ENST00000577308 85 ntBASIC2.68□□□□□ -1.98
SSR1P43307 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
SSR1P43307 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.68□□□□□ -1.98
SSR1P43307 AC011471.1-201ENST00000585766 187 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AL121652.1-201ENST00000608851 448 ntBASIC2.68□□□□□ -1.98
SSR1P43307 MIR6130-201ENST00000619419 109 ntBASIC2.68□□□□□ -1.98
SSR1P43307 AC002550.2-201ENST00000621246 394 ntBASIC2.68□□□□□ -1.98
SSR1P43307 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSR1P43307 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.68□□□□□ -1.98
SSR1P43307 AC004808.1-201ENST00000627671 721 ntBASIC2.68□□□□□ -1.98
SSR1P43307 LINC02211-204ENST00000642024 1070 ntBASIC2.68□□□□□ -1.98
SSR1P43307 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.68□□□□□ -1.98
SSR1P43307 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
SSR1P43307 AL356473.1-201ENST00000406203 1408 ntBASIC2.68□□□□□ -1.98
SSR1P43307 OR5J1P-201ENST00000313544 939 ntBASIC2.67□□□□□ -1.98
SSR1P43307 RNU1-100P-201ENST00000365255 165 ntBASIC2.67□□□□□ -1.98
SSR1P43307 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
SSR1P43307 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
SSR1P43307 RNU6-1207P-201ENST00000384343 107 ntBASIC2.67□□□□□ -1.98
SSR1P43307 SNORD23.1-201ENST00000408212 104 ntBASIC2.67□□□□□ -1.98
SSR1P43307 CCDC58P2-201ENST00000417131 366 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC007919.1-201ENST00000429380 217 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.67□□□□□ -1.98
SSR1P43307 MTND5P14-201ENST00000441481 1267 ntBASIC2.67□□□□□ -1.98
SSR1P43307 EEF1E1P1-201ENST00000446998 430 ntBASIC2.67□□□□□ -1.98
SSR1P43307 RPL23AP45-201ENST00000476406 468 ntBASIC2.67□□□□□ -1.98
SSR1P43307 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
SSR1P43307 RPS27P27-201ENST00000498779 255 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.67□□□□□ -1.98
SSR1P43307 AC022447.3-201ENST00000506865 495 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC021146.8-201ENST00000507455 733 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.67□□□□□ -1.98
SSR1P43307 RPL23AP84-201ENST00000571193 464 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.67□□□□□ -1.98
SSR1P43307 AC005498.1-201ENST00000592125 465 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC068313.1-201ENST00000604028 1008 ntBASIC2.67□□□□□ -1.98
SSR1P43307 ATP1B3P1-201ENST00000605365 821 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC005000.2-201ENST00000605468 310 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC104763.3-201ENST00000613765 618 ntBASIC2.67□□□□□ -1.98
SSR1P43307 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AL121895.2-201ENST00000619558 447 ntBASIC2.67□□□□□ -1.98
SSR1P43307 AC116618.1-201ENST00000634617 774 ntBASIC2.67□□□□□ -1.98
SSR1P43307 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SSR1P43307 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.67□□□□□ -1.98
SSR1P43307 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 RNU4-52P-201ENST00000384209 138 ntBASIC2.66□□□□□ -1.98
SSR1P43307 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SSR1P43307 AL162578.1-201ENST00000406202 378 ntBASIC2.66□□□□□ -1.98
SSR1P43307 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 NPM1P11-201ENST00000417106 855 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AC107083.1-201ENST00000439643 279 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AP000936.2-201ENST00000447151 681 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.66□□□□□ -1.98
SSR1P43307 snoU13.8-201ENST00000458890 104 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AC126182.1-201ENST00000478134 357 ntBASIC2.66□□□□□ -1.98
SSR1P43307 RPS3AP14-201ENST00000483907 780 ntBASIC2.66□□□□□ -1.98
SSR1P43307 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AC103783.1-201ENST00000520506 373 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AP002748.2-201ENST00000528671 348 ntBASIC2.66□□□□□ -1.98
SSR1P43307 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AL132857.1-201ENST00000555180 708 ntBASIC2.66□□□□□ -1.98
SSR1P43307 CYCSP2-201ENST00000558168 301 ntBASIC2.66□□□□□ -1.98
SSR1P43307 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.66□□□□□ -1.98
SSR1P43307 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AC011451.2-201ENST00000604303 598 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 AL445264.1-201ENST00000621719 171 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AC073308.1-201ENST00000623696 305 ntBASIC2.66□□□□□ -1.98
SSR1P43307 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
SSR1P43307 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.66□□□□□ -1.98
SSR1P43307 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSR1P43307 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSR1P43307 AL359851.1-201ENST00000569460 4997 ntBASIC2.65□□□□□ -1.98
SSR1P43307 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.65□□□□□ -1.98
SSR1P43307 SNORD116.1-201ENST00000365628 92 ntBASIC2.65□□□□□ -1.99
SSR1P43307 SNORA9-201ENST00000384215 133 ntBASIC2.65□□□□□ -1.99
SSR1P43307 RNU6-301P-201ENST00000384277 107 ntBASIC2.65□□□□□ -1.99
SSR1P43307 RNU6-1257P-201ENST00000384625 110 ntBASIC2.65□□□□□ -1.99
SSR1P43307 RNU6-114P-201ENST00000384704 105 ntBASIC2.65□□□□□ -1.99
SSR1P43307 MIR196B-201ENST00000384852 84 ntBASIC2.65□□□□□ -1.99
SSR1P43307 HMGB1P17-201ENST00000403495 628 ntBASIC2.65□□□□□ -1.99
SSR1P43307 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSR1P43307 RNU6-920P-201ENST00000410926 92 ntBASIC2.65□□□□□ -1.99
SSR1P43307 SEPT2P1-201ENST00000419651 180 ntBASIC2.65□□□□□ -1.99
SSR1P43307 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms