Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNFP41002 AC026782.1-201ENST00000512952 449 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC087854.1-201ENST00000519706 414 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC090151.1-201ENST00000520784 730 ntBASIC4.68□□□□□ -1.66
CCNFP41002 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCNFP41002 AC133555.2-201ENST00000550213 292 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNFP41002 AC010653.1-201ENST00000571108 881 ntBASIC4.68□□□□□ -1.66
CCNFP41002 MIR3667-201ENST00000581025 74 ntBASIC4.68□□□□□ -1.66
CCNFP41002 SNRPGP15-201ENST00000600149 222 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC015813.4-201ENST00000610469 179 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC007485.1-201ENST00000616755 206 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC098657.3-201ENST00000620434 263 ntBASIC4.68□□□□□ -1.66
CCNFP41002 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNFP41002 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCNFP41002 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNFP41002 RNU6-1115P-201ENST00000362490 106 ntBASIC4.67□□□□□ -1.66
CCNFP41002 Y_RNA.133-201ENST00000363428 110 ntBASIC4.67□□□□□ -1.66
CCNFP41002 RNA5SP113-201ENST00000410486 84 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 MCFD2P1-201ENST00000417812 300 ntBASIC4.67□□□□□ -1.66
CCNFP41002 ATG3P1-201ENST00000419507 911 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AL358176.2-201ENST00000425769 204 ntBASIC4.67□□□□□ -1.66
CCNFP41002 MTCO1P39-201ENST00000426148 480 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 NRBF2P3-201ENST00000432731 865 ntBASIC4.67□□□□□ -1.66
CCNFP41002 RPL23AP50-201ENST00000434149 455 ntBASIC4.67□□□□□ -1.66
CCNFP41002 HIGD1AP11-201ENST00000438361 280 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNFP41002 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 AL359672.1-201ENST00000442302 409 ntBASIC4.67□□□□□ -1.66
CCNFP41002 HSFY6P-201ENST00000445573 403 ntBASIC4.67□□□□□ -1.66
CCNFP41002 BTF3P15-201ENST00000455606 336 ntBASIC4.67□□□□□ -1.66
CCNFP41002 RPS3AP41-201ENST00000462701 778 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
CCNFP41002 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 AC009901.1-201ENST00000506703 541 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC096745.1-201ENST00000509945 370 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNFP41002 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.67□□□□□ -1.66
CCNFP41002 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.67□□□□□ -1.66
CCNFP41002 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.67□□□□□ -1.66
CCNFP41002 MTCO3P23-201ENST00000561363 289 ntBASIC4.67□□□□□ -1.66
CCNFP41002 RN7SL652P-201ENST00000577769 300 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 BDH2P1-201ENST00000602288 736 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC106900.2-201ENST00000604994 317 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC018462.2-201ENST00000605375 395 ntBASIC4.67□□□□□ -1.66
CCNFP41002 AC006157.1-201ENST00000611750 366 ntBASIC4.67□□□□□ -1.66
CCNFP41002 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 PNPT1P2-201ENST00000456768 2050 ntBASIC4.67□□□□□ -1.66
CCNFP41002 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCNFP41002 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCNFP41002 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.67□□□□□ -1.66
CCNFP41002 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCNFP41002 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCNFP41002 AC139713.2-215ENST00000641428 5037 ntBASIC4.67□□□□□ -1.66
CCNFP41002 MTND5P30-201ENST00000452896 1731 ntBASIC4.66□□□□□ -1.66
CCNFP41002 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCNFP41002 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCNFP41002 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCNFP41002 Y_RNA.2-201ENST00000362330 96 ntBASIC4.66□□□□□ -1.66
CCNFP41002 RNU6-266P-201ENST00000364225 107 ntBASIC4.66□□□□□ -1.66
CCNFP41002 Y_RNA.364-201ENST00000365532 101 ntBASIC4.66□□□□□ -1.66
CCNFP41002 MIR585-201ENST00000384887 94 ntBASIC4.66□□□□□ -1.66
CCNFP41002 MIR550A3-201ENST00000390735 95 ntBASIC4.66□□□□□ -1.66
CCNFP41002 EI24P1-201ENST00000416584 867 ntBASIC4.66□□□□□ -1.66
CCNFP41002 RPL26P6-201ENST00000440913 438 ntBASIC4.66□□□□□ -1.66
CCNFP41002 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNFP41002 RPL12P25-201ENST00000455592 494 ntBASIC4.66□□□□□ -1.66
CCNFP41002 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNFP41002 RPL21P41-201ENST00000459863 264 ntBASIC4.66□□□□□ -1.66
CCNFP41002 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.66□□□□□ -1.66
CCNFP41002 AC084198.1-201ENST00000477747 402 ntBASIC4.66□□□□□ -1.66
CCNFP41002 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNFP41002 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.66□□□□□ -1.66
CCNFP41002 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNFP41002 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNFP41002 SNORA31.20-201ENST00000517111 133 ntBASIC4.66□□□□□ -1.66
CCNFP41002 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.66□□□□□ -1.66
CCNFP41002 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNFP41002 MIR5692A1-201ENST00000580523 69 ntBASIC4.66□□□□□ -1.66
CCNFP41002 MIR4680-201ENST00000580906 66 ntBASIC4.66□□□□□ -1.66
CCNFP41002 MIR4737-201ENST00000583979 81 ntBASIC4.66□□□□□ -1.66
CCNFP41002 NUTF2P8-201ENST00000604593 363 ntBASIC4.66□□□□□ -1.66
CCNFP41002 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.66□□□□□ -1.66
CCNFP41002 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNFP41002 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.66□□□□□ -1.66
CCNFP41002 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms