Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AP000776.1-201ENST00000530032 1663 ntBASIC2.57□□□□□ -2
HOXA9P31269 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HOXA9P31269 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXA9P31269 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.56□□□□□ -2
HOXA9P31269 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXA9P31269 AC006378.2-201ENST00000623178 2476 ntBASIC2.56□□□□□ -2
HOXA9P31269 Y_RNA.311-201ENST00000365068 96 ntBASIC2.56□□□□□ -2
HOXA9P31269 MIR504-201ENST00000385065 83 ntBASIC2.56□□□□□ -2
HOXA9P31269 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXA9P31269 RPS15AP38-201ENST00000413110 372 ntBASIC2.56□□□□□ -2
HOXA9P31269 TIMM9P2-201ENST00000419324 266 ntBASIC2.56□□□□□ -2
HOXA9P31269 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
HOXA9P31269 RPL23AP74-201ENST00000437246 471 ntBASIC2.56□□□□□ -2
HOXA9P31269 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC005297.2-201ENST00000450430 606 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC026410.2-201ENST00000460281 156 ntBASIC2.56□□□□□ -2
HOXA9P31269 RPS15AP34-201ENST00000487776 387 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC006499.2-201ENST00000513470 337 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 OR4P1P-201ENST00000530808 1136 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.56□□□□□ -2
HOXA9P31269 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
HOXA9P31269 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
HOXA9P31269 AC012669.1-201ENST00000603209 283 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC243773.3-201ENST00000613270 256 ntBASIC2.56□□□□□ -2
HOXA9P31269 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.56□□□□□ -2
HOXA9P31269 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HOXA9P31269 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HOXA9P31269 AC006020.1-201ENST00000420179 1854 ntBASIC2.56□□□□□ -2
HOXA9P31269 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
HOXA9P31269 RNU6-173P-201ENST00000364215 104 ntBASIC2.55□□□□□ -2
HOXA9P31269 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.55□□□□□ -2
HOXA9P31269 RPL23AP29-201ENST00000397284 453 ntBASIC2.55□□□□□ -2
HOXA9P31269 ZNF876P-202ENST00000398732 1485 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.55□□□□□ -2
HOXA9P31269 TOMM20P4-201ENST00000427861 435 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.55□□□□□ -2
HOXA9P31269 OR6K5P-201ENST00000447050 945 ntBASIC2.55□□□□□ -2
HOXA9P31269 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXA9P31269 FDX1P2-201ENST00000450769 375 ntBASIC2.55□□□□□ -2
HOXA9P31269 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.55□□□□□ -2
HOXA9P31269 SNORD11.1-201ENST00000459482 85 ntBASIC2.55□□□□□ -2
HOXA9P31269 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.55□□□□□ -2
HOXA9P31269 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.55□□□□□ -2
HOXA9P31269 AC090453.1-201ENST00000495560 436 ntBASIC2.55□□□□□ -2
HOXA9P31269 CBX3P3-201ENST00000508108 532 ntBASIC2.55□□□□□ -2
HOXA9P31269 XKRY-201ENST00000510392 1100 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC008716.1-201ENST00000511084 513 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.55□□□□□ -2
HOXA9P31269 HMGB1P41-201ENST00000520234 440 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.55□□□□□ -2
HOXA9P31269 AC123904.3-201ENST00000547218 814 ntBASIC2.55□□□□□ -2
HOXA9P31269 EEF1B2P4-201ENST00000551398 348 ntBASIC2.55□□□□□ -2
HOXA9P31269 MTND1P24-201ENST00000552175 861 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.55□□□□□ -2
HOXA9P31269 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
HOXA9P31269 MIR3609-201ENST00000582661 80 ntBASIC2.55□□□□□ -2
HOXA9P31269 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.55□□□□□ -2
HOXA9P31269 AP000787.2-201ENST00000604432 568 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC007349.4-201ENST00000608114 532 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC245517.5-201ENST00000611529 162 ntBASIC2.55□□□□□ -2
HOXA9P31269 AL161629.2-201ENST00000615347 275 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC025588.4-201ENST00000615802 908 ntBASIC2.55□□□□□ -2
HOXA9P31269 AC068787.1-201ENST00000623908 691 ntBASIC2.55□□□□□ -2
HOXA9P31269 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
HOXA9P31269 CRYM-AS1-204ENST00000637983 556 ntBASIC2.55□□□□□ -2
HOXA9P31269 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.55□□□□□ -2
HOXA9P31269 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
HOXA9P31269 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
HOXA9P31269 AL513185.3-201ENST00000433335 1300 ntBASIC2.54□□□□□ -2
HOXA9P31269 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
HOXA9P31269 RNU6-1122P-201ENST00000384449 107 ntBASIC2.54□□□□□ -2
HOXA9P31269 CYCSP45-201ENST00000402289 315 ntBASIC2.54□□□□□ -2
HOXA9P31269 RNU2-15P-201ENST00000410692 191 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
HOXA9P31269 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.54□□□□□ -2
HOXA9P31269 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 DPH3P2-201ENST00000422618 250 ntBASIC2.54□□□□□ -2
HOXA9P31269 RPL7P37-201ENST00000425095 738 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC007742.1-201ENST00000425789 329 ntBASIC2.54□□□□□ -2
HOXA9P31269 EZH2P1-201ENST00000431167 291 ntBASIC2.54□□□□□ -2
HOXA9P31269 ELOCP26-201ENST00000436067 329 ntBASIC2.54□□□□□ -2
HOXA9P31269 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.54□□□□□ -2
HOXA9P31269 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
HOXA9P31269 FAM103A2P-201ENST00000444122 354 ntBASIC2.54□□□□□ -2
HOXA9P31269 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.54□□□□□ -2
HOXA9P31269 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.54□□□□□ -2
HOXA9P31269 WASF1P1-201ENST00000447560 1131 ntBASIC2.54□□□□□ -2
HOXA9P31269 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
HOXA9P31269 OFD1P3Y-201ENST00000453312 783 ntBASIC2.54□□□□□ -2
HOXA9P31269 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms