Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.07□□□□□ -1.76
POLR2AP24928 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.07□□□□□ -1.76
POLR2AP24928 LLPHP1-201ENST00000603571 367 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 uc_338.5-201ENST00000611839 155 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 AC241377.1-201ENST00000619797 406 ntBASIC4.07□□□□□ -1.76
POLR2AP24928 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
POLR2AP24928 AL606537.1-201ENST00000607258 2011 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
POLR2AP24928 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.06□□□□□ -1.76
POLR2AP24928 AC073343.1-201ENST00000328239 651 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 Y_RNA.128-201ENST00000363391 112 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 Y_RNA.339-201ENST00000365325 102 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 RNU6-193P-201ENST00000410977 107 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 AL031663.1-201ENST00000437445 219 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 MTND3P2-201ENST00000438452 342 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.06□□□□□ -1.76
POLR2AP24928 RNU7-63P-201ENST00000459054 62 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 Y_RNA.632-201ENST00000459189 102 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 MTCO2P29-201ENST00000465212 189 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.06□□□□□ -1.76
POLR2AP24928 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 AP000857.1-201ENST00000532151 543 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AC093027.1-201ENST00000546698 429 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 HIGD1AP1-201ENST00000550979 275 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AC005476.1-201ENST00000554427 397 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 MIR3146-201ENST00000580367 79 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 AL451007.1-201ENST00000595491 289 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 BCRP9-201ENST00000605312 388 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.06□□□□□ -1.76
POLR2AP24928 MIR7851-201ENST00000610611 160 ntBASIC4.06□□□□□ -1.76
POLR2AP24928 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.06□□□□□ -1.76
POLR2AP24928 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
POLR2AP24928 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
POLR2AP24928 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
POLR2AP24928 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.06□□□□□ -1.76
POLR2AP24928 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.06□□□□□ -1.76
POLR2AP24928 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
POLR2AP24928 MIR369-201ENST00000362155 70 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 RPS20P32-201ENST00000456044 356 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 RPL27AP5-201ENST00000469428 449 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 RPL23AP11-201ENST00000475260 469 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AL163540.1-201ENST00000485382 386 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 TMEM251P1-201ENST00000503717 318 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.05□□□□□ -1.76
POLR2AP24928 TXNP6-201ENST00000510190 310 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 RNU6-488P-201ENST00000515918 99 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 FTH1P11-201ENST00000517577 551 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC007621.1-201ENST00000604544 437 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC073657.2-201ENST00000605661 303 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC022149.2-201ENST00000621061 203 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 PLCE1P1-201ENST00000622094 305 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 AC004944.1-201ENST00000517807 3059 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC004972.1-201ENST00000623934 2209 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
POLR2AP24928 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
POLR2AP24928 Y_RNA.231-201ENST00000364358 102 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 SNORA20.2-201ENST00000383922 131 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AL139095.1-201ENST00000404326 391 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC009161.1-201ENST00000417306 376 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 ARL5AP1-201ENST00000418991 388 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 AL353729.1-201ENST00000425044 720 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.05□□□□□ -1.76
POLR2AP24928 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 HMGB3P9-201ENST00000441799 583 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 RN7SKP24-201ENST00000515888 284 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC022616.6-201ENST00000520479 119 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC107953.1-201ENST00000522216 297 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.05□□□□□ -1.76
POLR2AP24928 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.05□□□□□ -1.76
POLR2AP24928 AC008737.2-201ENST00000599446 118 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC093732.2-201ENST00000607950 274 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 SNORD39.4-201ENST00000620099 78 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AC011266.1-201ENST00000624119 3569 ntBASIC4.05□□□□□ -1.76
POLR2AP24928 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms