Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC021146.8-201ENST00000507455 733 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC008494.2-201ENST00000514544 370 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU2-58P-201ENST00000516403 183 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 AL354943.1-201ENST00000572103 781 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AL592221.1-201ENST00000605266 382 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC138649.5-201ENST00000637456 137 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC007256.1-201ENST00000392253 2765 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU4-68P-201ENST00000364314 141 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RN7SKP226-201ENST00000364912 300 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU6-224P-201ENST00000384055 107 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU6-1151P-201ENST00000384684 107 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 RPS7P9-201ENST00000414704 586 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AL008987.1-201ENST00000415528 237 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 TPMTP4-201ENST00000450749 678 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.01□□□□□ -2.09
COL5A1P20908 AL109741.2-201ENST00000455561 343 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 RPL38P4-201ENST00000502376 214 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 OR5H4P-201ENST00000510851 923 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.01□□□□□ -2.09
COL5A1P20908 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL5A1P20908 RNU4-60P-201ENST00000517239 135 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC008562.1-201ENST00000521763 330 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC087241.2-201ENST00000535801 324 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC087465.1-201ENST00000560574 245 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.01□□□□□ -2.09
COL5A1P20908 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 AC009220.3-201ENST00000604318 586 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 AC122133.1-201ENST00000613964 233 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.01□□□□□ -2.09
COL5A1P20908 MIR3974-201ENST00000637126 96 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 MIR1322-201ENST00000638013 71 ntBASIC2.01□□□□□ -2.09
COL5A1P20908 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
COL5A1P20908 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2□□□□□ -2.09
COL5A1P20908 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2□□□□□ -2.09
COL5A1P20908 AL391994.1-201ENST00000254724 282 ntBASIC2□□□□□ -2.09
COL5A1P20908 RNU6-707P-201ENST00000364647 95 ntBASIC2□□□□□ -2.09
COL5A1P20908 RNU6-1200P-201ENST00000384162 107 ntBASIC2□□□□□ -2.09
COL5A1P20908 RNU6-636P-201ENST00000384598 107 ntBASIC2□□□□□ -2.09
COL5A1P20908 TMSB4XP8-201ENST00000402089 135 ntBASIC2□□□□□ -2.09
COL5A1P20908 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 TMSB4XP6-201ENST00000415187 135 ntBASIC2□□□□□ -2.09
COL5A1P20908 RPL30P3-201ENST00000424262 333 ntBASIC2□□□□□ -2.09
COL5A1P20908 TMSB4XP1-201ENST00000424567 135 ntBASIC2□□□□□ -2.09
COL5A1P20908 C1DP1-201ENST00000426049 402 ntBASIC2□□□□□ -2.09
COL5A1P20908 DPPA2P1-201ENST00000428060 556 ntBASIC2□□□□□ -2.09
COL5A1P20908 BLOC1S2P1-201ENST00000428431 301 ntBASIC2□□□□□ -2.09
COL5A1P20908 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 ATP5F1P1-201ENST00000433775 569 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL354941.1-201ENST00000438600 464 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 FGF7P5-201ENST00000441829 291 ntBASIC2□□□□□ -2.09
COL5A1P20908 CBWD4P-201ENST00000445695 655 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 AC069528.1-202ENST00000482888 637 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2□□□□□ -2.09
COL5A1P20908 AC113347.3-201ENST00000509113 148 ntBASIC2□□□□□ -2.09
COL5A1P20908 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 RNU6-1129P-201ENST00000515964 104 ntBASIC2□□□□□ -2.09
COL5A1P20908 Y_RNA.688-201ENST00000516565 95 ntBASIC2□□□□□ -2.09
COL5A1P20908 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2□□□□□ -2.09
COL5A1P20908 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2□□□□□ -2.09
COL5A1P20908 AC126177.3-201ENST00000551839 688 ntBASIC2□□□□□ -2.09
COL5A1P20908 NBEAP1-201ENST00000554452 979 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2□□□□□ -2.09
COL5A1P20908 PIGPP4-201ENST00000584447 307 ntBASIC2□□□□□ -2.09
COL5A1P20908 RPL23AP78-201ENST00000599928 470 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL020997.3-201ENST00000602843 359 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL353778.1-201ENST00000603149 408 ntBASIC2□□□□□ -2.09
COL5A1P20908 AL133507.1-201ENST00000605269 557 ntBASIC2□□□□□ -2.09
COL5A1P20908 VIS1.1-201ENST00000610517 203 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC105429.2-201ENST00000610567 517 ntBASIC2□□□□□ -2.09
COL5A1P20908 AC084782.3-201ENST00000612282 578 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms