Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC096644.4-201ENST00000563417 2912 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 RPL21P132-201ENST00000331267 462 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 SET-203ENST00000372688 801 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 RNU6-83P-201ENST00000384568 112 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AL356057.2-201ENST00000403318 432 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC022018.1-201ENST00000430685 241 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC020550.1-201ENST00000447385 163 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 NANOGNBP1-201ENST00000448444 480 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC126182.1-201ENST00000478134 357 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC105252.1-201ENST00000503089 286 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 RNU6-927P-201ENST00000516199 100 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 SCARNA1-201ENST00000517138 166 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC093012.1-202ENST00000549403 582 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 MIR4506-201ENST00000584693 77 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 OR1M4P-201ENST00000589199 287 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC021171.1-201ENST00000603137 706 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC015871.2-201ENST00000603605 948 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AL136370.1-201ENST00000608166 691 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 Z99129.2-201ENST00000619967 314 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC103798.2-201ENST00000624292 632 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DPA1P20036 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
HLA-DPA1P20036 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 Y_RNA.245-201ENST00000364493 95 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC119751.3-201ENST00000399720 670 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MTND4P13-201ENST00000402078 1023 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RPL19P1-201ENST00000411635 428 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MTCO2P21-201ENST00000419780 677 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC244035.1-201ENST00000430042 390 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC092427.1-202ENST00000430569 476 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RPS15AP5-201ENST00000436276 388 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL513043.1-201ENST00000439124 535 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RPS15AP7-201ENST00000439294 405 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MTATP6P30-201ENST00000443540 664 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 DPPA3P1-201ENST00000448050 469 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC013267.1-201ENST00000458227 267 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RPS15AP34-201ENST00000487776 387 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RN7SL283P-201ENST00000489055 303 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC104685.1-201ENST00000502445 371 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RNA5SP380-201ENST00000517190 98 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL157394.1-201ENST00000562983 1224 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AL049838.1-201ENST00000563647 981 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MIR544B-201ENST00000582372 78 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC012150.2-201ENST00000621300 544 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC010338.1-201ENST00000621823 717 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 AC103706.2-201ENST00000638080 240 ntBASIC2.94□□□□□ -1.94
HLA-DPA1P20036 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DPA1P20036 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPA1P20036 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DPA1P20036 FAM133CP-201ENST00000332869 704 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 RNU6-433P-201ENST00000363216 104 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 RNA5SP88-201ENST00000365560 109 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DPA1P20036 RNU2-25P-201ENST00000411041 191 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.93□□□□□ -1.94
HLA-DPA1P20036 AC023141.4-201ENST00000412031 328 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms