Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPL21P132-201ENST00000331267 462 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 RNA5SP88-201ENST00000365560 109 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 MIR9-1-201ENST00000385198 89 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 RAP1BP1-201ENST00000412709 553 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 LSM1P1-201ENST00000438629 273 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 RNU6-420P-201ENST00000458780 107 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 SETP11-201ENST00000473027 690 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC006445.2-201ENST00000510061 472 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 CASP1P1-201ENST00000526345 212 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC124947.2-202ENST00000552735 133 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
XRCC1P18887 AL355836.1-201ENST00000555951 870 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC105148.1-201ENST00000604961 409 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC024560.3-201ENST00000608482 349 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC093838.1-201ENST00000613014 469 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AL603758.1-201ENST00000618654 241 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 MIR6852-201ENST00000621699 66 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
XRCC1P18887 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
XRCC1P18887 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
XRCC1P18887 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
XRCC1P18887 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
XRCC1P18887 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
XRCC1P18887 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
XRCC1P18887 SNORA23-201ENST00000365128 182 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
XRCC1P18887 RNU6-432P-201ENST00000384196 109 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 MTND4P13-201ENST00000402078 1023 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC092573.2-201ENST00000434546 243 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 UBE2FP3-201ENST00000436366 524 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 RSU1P2-202ENST00000437884 485 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AL513043.1-201ENST00000439124 535 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.71□□□□□ -1.98
XRCC1P18887 AL109741.2-201ENST00000455561 343 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 RPS20P20-201ENST00000460498 340 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AC008571.1-201ENST00000467232 300 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 RN7SKP265-201ENST00000516448 223 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 RNU6-1282P-201ENST00000516735 96 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
XRCC1P18887 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.71□□□□□ -1.98
XRCC1P18887 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 DNAJC8P1-201ENST00000554535 372 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AC090888.2-201ENST00000559765 1144 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AC009097.3-201ENST00000563557 1018 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 ACTR3BP3-201ENST00000565577 979 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 MIR4999-201ENST00000585029 91 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC021171.1-201ENST00000603137 706 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AP000787.2-201ENST00000604432 568 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.71□□□□□ -1.98
XRCC1P18887 AL356596.1-201ENST00000624230 379 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.71□□□□□ -1.98
XRCC1P18887 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
XRCC1P18887 AC006378.2-201ENST00000623178 2476 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AL138713.1-201ENST00000624026 2130 ntBASIC2.71□□□□□ -1.98
XRCC1P18887 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.7□□□□□ -1.98
XRCC1P18887 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
XRCC1P18887 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
XRCC1P18887 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
XRCC1P18887 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 AL138827.1-201ENST00000402666 306 ntBASIC2.7□□□□□ -1.98
XRCC1P18887 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms