Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.19□□□□□ -1.58
LIG1P18858 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.19□□□□□ -1.58
LIG1P18858 CECR9-201ENST00000453421 199 ntBASIC5.19□□□□□ -1.58
LIG1P18858 RPL12P25-201ENST00000455592 494 ntBASIC5.19□□□□□ -1.58
LIG1P18858 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.19□□□□□ -1.58
LIG1P18858 U8.20-201ENST00000459445 131 ntBASIC5.19□□□□□ -1.58
LIG1P18858 AC128713.1-201ENST00000471495 306 ntBASIC5.19□□□□□ -1.58
LIG1P18858 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.19□□□□□ -1.58
LIG1P18858 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.19□□□□□ -1.58
LIG1P18858 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.19□□□□□ -1.58
LIG1P18858 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.19□□□□□ -1.58
LIG1P18858 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.19□□□□□ -1.58
LIG1P18858 IGLVIV-53-201ENST00000520107 367 ntBASIC5.19□□□□□ -1.58
LIG1P18858 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.19□□□□□ -1.58
LIG1P18858 AC090115.3-201ENST00000553218 849 ntBASIC5.19□□□□□ -1.58
LIG1P18858 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.19□□□□□ -1.58
LIG1P18858 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.19□□□□□ -1.58
LIG1P18858 AC008521.1-201ENST00000587471 187 ntBASIC5.19□□□□□ -1.58
LIG1P18858 AL451044.1-201ENST00000604867 238 ntBASIC5.19□□□□□ -1.58
LIG1P18858 PRR13P7-201ENST00000605538 430 ntBASIC5.19□□□□□ -1.58
LIG1P18858 AC091905.2-201ENST00000623143 306 ntBASIC5.19□□□□□ -1.58
LIG1P18858 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIG1P18858 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIG1P18858 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIG1P18858 AC116667.1-201ENST00000604855 2072 ntBASIC5.19□□□□□ -1.58
LIG1P18858 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIG1P18858 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIG1P18858 RNVU1-6-201ENST00000364688 164 ntBASIC5.18□□□□□ -1.58
LIG1P18858 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIG1P18858 Y_RNA.399-201ENST00000383955 105 ntBASIC5.18□□□□□ -1.58
LIG1P18858 RNY1P14-201ENST00000384426 108 ntBASIC5.18□□□□□ -1.58
LIG1P18858 BX682237.1-201ENST00000415016 335 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC140479.3-201ENST00000418944 1126 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC096644.2-201ENST00000429278 159 ntBASIC5.18□□□□□ -1.58
LIG1P18858 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 SCARNA10-201ENST00000459255 330 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC010326.1-201ENST00000462726 602 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC053481.1-201ENST00000467217 306 ntBASIC5.18□□□□□ -1.58
LIG1P18858 RPS29P22-201ENST00000472363 168 ntBASIC5.18□□□□□ -1.58
LIG1P18858 TRBV1-201ENST00000476502 284 ntBASIC5.18□□□□□ -1.58
LIG1P18858 RN7SL459P-201ENST00000481078 302 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.18□□□□□ -1.58
LIG1P18858 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 AC116337.1-201ENST00000509680 687 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 RNU6-1271P-201ENST00000517049 105 ntBASIC5.18□□□□□ -1.58
LIG1P18858 DEFB108D-201ENST00000527787 222 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.18□□□□□ -1.58
LIG1P18858 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIG1P18858 RANP3-201ENST00000530970 276 ntBASIC5.18□□□□□ -1.58
LIG1P18858 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.18□□□□□ -1.58
LIG1P18858 MIR3941-201ENST00000582572 103 ntBASIC5.18□□□□□ -1.58
LIG1P18858 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.18□□□□□ -1.58
LIG1P18858 AC007566.2-201ENST00000603642 413 ntBASIC5.18□□□□□ -1.58
LIG1P18858 AC011890.2-201ENST00000613393 294 ntBASIC5.18□□□□□ -1.58
LIG1P18858 FAM157A-202ENST00000615155 405 ntBASIC5.18□□□□□ -1.58
LIG1P18858 PISRT1.1-201ENST00000616930 107 ntBASIC5.18□□□□□ -1.58
LIG1P18858 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.18□□□□□ -1.58
LIG1P18858 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIG1P18858 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
LIG1P18858 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIG1P18858 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.18□□□□□ -1.58
LIG1P18858 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LIG1P18858 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIG1P18858 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIG1P18858 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.17□□□□□ -1.58
LIG1P18858 IQCB2P-201ENST00000401788 1633 ntBASIC5.17□□□□□ -1.58
LIG1P18858 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LIG1P18858 RNU6-128P-201ENST00000383976 107 ntBASIC5.17□□□□□ -1.58
LIG1P18858 RNU6-356P-201ENST00000384140 107 ntBASIC5.17□□□□□ -1.58
LIG1P18858 SNORA70E-201ENST00000384492 135 ntBASIC5.17□□□□□ -1.58
LIG1P18858 RNU6-1222P-201ENST00000384615 107 ntBASIC5.17□□□□□ -1.58
LIG1P18858 MIR3074-201ENST00000384885 81 ntBASIC5.17□□□□□ -1.58
LIG1P18858 SNORA75.6-201ENST00000391318 127 ntBASIC5.17□□□□□ -1.58
LIG1P18858 RN7SKP216-201ENST00000411050 312 ntBASIC5.17□□□□□ -1.58
LIG1P18858 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.17□□□□□ -1.58
LIG1P18858 AL590139.1-201ENST00000416267 400 ntBASIC5.17□□□□□ -1.58
LIG1P18858 EIF4EP1-201ENST00000422311 642 ntBASIC5.17□□□□□ -1.58
LIG1P18858 USP9YP7-201ENST00000436723 430 ntBASIC5.17□□□□□ -1.58
LIG1P18858 USP9YP32-201ENST00000452432 430 ntBASIC5.17□□□□□ -1.58
LIG1P18858 DYNLL1P5-201ENST00000467158 270 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AC012158.1-204ENST00000483430 465 ntBASIC5.17□□□□□ -1.58
LIG1P18858 RN7SL432P-201ENST00000484057 298 ntBASIC5.17□□□□□ -1.58
LIG1P18858 HMGN1P28-201ENST00000521340 364 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.17□□□□□ -1.58
LIG1P18858 AL110118.1-201ENST00000553543 400 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.17□□□□□ -1.58
LIG1P18858 MYL12BP1-201ENST00000569826 507 ntBASIC5.17□□□□□ -1.58
LIG1P18858 NUTF2P8-201ENST00000604593 363 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AL354984.3-201ENST00000604803 325 ntBASIC5.17□□□□□ -1.58
LIG1P18858 ATP5A1P2-202ENST00000616464 443 ntBASIC5.17□□□□□ -1.58
LIG1P18858 AC006065.5-201ENST00000623427 349 ntBASIC5.17□□□□□ -1.58
LIG1P18858 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.17□□□□□ -1.58
LIG1P18858 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
LIG1P18858 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms