Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC092192.1-201ENST00000633154 1018 ntBASIC3.17□□□□□ -1.9
PDGFRAP16234 AC097655.1-201ENST00000635075 318 ntBASIC3.17□□□□□ -1.9
PDGFRAP16234 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.17□□□□□ -1.9
PDGFRAP16234 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
PDGFRAP16234 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.17□□□□□ -1.9
PDGFRAP16234 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PDGFRAP16234 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFRAP16234 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFRAP16234 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFRAP16234 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFRAP16234 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFRAP16234 RNA5SP139-201ENST00000364340 117 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PDGFRAP16234 SNORA54-201ENST00000384281 123 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 MIR325-201ENST00000385260 98 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RPL21P24-201ENST00000413752 448 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 Z85995.1-201ENST00000415547 335 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 USP9YP26-201ENST00000421008 661 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.16□□□□□ -1.9
PDGFRAP16234 AC091390.3-201ENST00000426478 338 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFRAP16234 AL512844.2-201ENST00000433990 593 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFRAP16234 UBE2D3P1-201ENST00000436669 444 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL049734.2-201ENST00000441066 616 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFRAP16234 RN7SL75P-201ENST00000461926 281 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RPL30P6-201ENST00000475925 342 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RPS3AP22-201ENST00000488297 769 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 RN7SL633P-201ENST00000488974 297 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFRAP16234 MRPS33P3-201ENST00000513456 322 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.16□□□□□ -1.9
PDGFRAP16234 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC100870.1-201ENST00000522035 505 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFRAP16234 AP000867.2-201ENST00000532468 320 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFRAP16234 AC091489.2-201ENST00000566263 604 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 HMGB1P6-201ENST00000569046 646 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AL160281.1-201ENST00000605307 311 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 OR10AB1P-201ENST00000609613 938 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 MIR7844-201ENST00000616161 122 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC079248.2-201ENST00000623779 326 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 AC079416.3-201ENST00000624479 549 ntBASIC3.16□□□□□ -1.9
PDGFRAP16234 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFRAP16234 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDGFRAP16234 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
PDGFRAP16234 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
PDGFRAP16234 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PDGFRAP16234 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.9
PDGFRAP16234 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PDGFRAP16234 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
PDGFRAP16234 Y_RNA.46-201ENST00000362695 102 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 RNU6-501P-201ENST00000364072 100 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFRAP16234 RNU6-741P-201ENST00000383889 107 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC092047.1-201ENST00000424997 240 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AL512286.1-201ENST00000439244 400 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC005094.1-201ENST00000440420 368 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 GDI2P2-201ENST00000445131 608 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 SNRPGP6-201ENST00000451124 220 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFRAP16234 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFRAP16234 DSTNP2-201ENST00000504533 515 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC005178.1-201ENST00000508392 440 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PDGFRAP16234 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 TRAV28-201ENST00000557548 323 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AC131902.3-201ENST00000611767 581 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFRAP16234 AL356266.1-201ENST00000623311 483 ntBASIC3.15□□□□□ -1.91
PDGFRAP16234 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms