Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC6.64□□□□□ -1.35
CD44P16070 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD44P16070 AL513331.1-201ENST00000411908 397 ntBASIC6.64□□□□□ -1.35
CD44P16070 MYL6P5-201ENST00000412707 459 ntBASIC6.64□□□□□ -1.35
CD44P16070 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD44P16070 AC097359.1-201ENST00000447946 463 ntBASIC6.64□□□□□ -1.35
CD44P16070 RNU6-893P-201ENST00000458841 100 ntBASIC6.64□□□□□ -1.35
CD44P16070 RN7SL552P-201ENST00000462094 276 ntBASIC6.64□□□□□ -1.35
CD44P16070 AL591473.1-201ENST00000464297 313 ntBASIC6.64□□□□□ -1.35
CD44P16070 AC116917.1-201ENST00000520558 305 ntBASIC6.64□□□□□ -1.35
CD44P16070 UBE2Q2P8-201ENST00000560644 102 ntBASIC6.64□□□□□ -1.35
CD44P16070 AL022345.2-201ENST00000606307 135 ntBASIC6.64□□□□□ -1.35
CD44P16070 AC010325.3-201ENST00000641084 394 ntBASIC6.64□□□□□ -1.35
CD44P16070 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD44P16070 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.64□□□□□ -1.35
CD44P16070 AL589743.1-201ENST00000551932 2712 ntBASIC6.63□□□□□ -1.35
CD44P16070 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 AC006206.1-201ENST00000544842 3387 ntBASIC6.63□□□□□ -1.35
CD44P16070 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.63□□□□□ -1.35
CD44P16070 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 MIR188-201ENST00000385034 86 ntBASIC6.63□□□□□ -1.35
CD44P16070 SNORA40C-201ENST00000391285 128 ntBASIC6.63□□□□□ -1.35
CD44P16070 AL135786.1-201ENST00000415892 214 ntBASIC6.63□□□□□ -1.35
CD44P16070 RPL35AP31-201ENST00000418340 337 ntBASIC6.63□□□□□ -1.35
CD44P16070 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.63□□□□□ -1.35
CD44P16070 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 AC023141.3-201ENST00000436698 278 ntBASIC6.63□□□□□ -1.35
CD44P16070 REREP2Y-201ENST00000439103 200 ntBASIC6.63□□□□□ -1.35
CD44P16070 snoU109.2-201ENST00000459316 135 ntBASIC6.63□□□□□ -1.35
CD44P16070 SNRPCP11-201ENST00000492453 205 ntBASIC6.63□□□□□ -1.35
CD44P16070 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.63□□□□□ -1.35
CD44P16070 RMST_8.1-201ENST00000610287 165 ntBASIC6.63□□□□□ -1.35
CD44P16070 IGLL4P-201ENST00000614590 133 ntBASIC6.63□□□□□ -1.35
CD44P16070 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.63□□□□□ -1.35
CD44P16070 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD44P16070 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CD44P16070 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CD44P16070 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CD44P16070 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CD44P16070 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.62□□□□□ -1.35
CD44P16070 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.62□□□□□ -1.35
CD44P16070 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 RNU6-527P-201ENST00000363425 104 ntBASIC6.62□□□□□ -1.35
CD44P16070 RNU6-793P-201ENST00000384233 104 ntBASIC6.62□□□□□ -1.35
CD44P16070 RNU6-166P-201ENST00000384371 107 ntBASIC6.62□□□□□ -1.35
CD44P16070 AL590762.2-201ENST00000395798 571 ntBASIC6.62□□□□□ -1.35
CD44P16070 AL031003.1-201ENST00000404229 172 ntBASIC6.62□□□□□ -1.35
CD44P16070 FTH1P6-201ENST00000430768 320 ntBASIC6.62□□□□□ -1.35
CD44P16070 KRT8P51-201ENST00000438938 274 ntBASIC6.62□□□□□ -1.35
CD44P16070 AC108161.1-201ENST00000461060 402 ntBASIC6.62□□□□□ -1.35
CD44P16070 RPL31P13-201ENST00000484151 370 ntBASIC6.62□□□□□ -1.35
CD44P16070 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 MRPS21P8-201ENST00000569196 235 ntBASIC6.62□□□□□ -1.35
CD44P16070 MIR5571-201ENST00000577998 113 ntBASIC6.62□□□□□ -1.35
CD44P16070 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.62□□□□□ -1.35
CD44P16070 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CD44P16070 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.62□□□□□ -1.35
CD44P16070 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.62□□□□□ -1.35
CD44P16070 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CD44P16070 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.62□□□□□ -1.35
CD44P16070 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.62□□□□□ -1.35
CD44P16070 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 AC116096.1-201ENST00000566804 2314 ntBASIC6.61□□□□□ -1.35
CD44P16070 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD44P16070 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 RNU6-454P-201ENST00000364292 107 ntBASIC6.61□□□□□ -1.35
CD44P16070 U3.10-201ENST00000364459 214 ntBASIC6.61□□□□□ -1.35
CD44P16070 RNA5SP211-201ENST00000365516 117 ntBASIC6.61□□□□□ -1.35
CD44P16070 AP000936.3-201ENST00000438127 255 ntBASIC6.61□□□□□ -1.35
CD44P16070 AC243964.1-201ENST00000441814 261 ntBASIC6.61□□□□□ -1.35
CD44P16070 FTLP8-201ENST00000446770 267 ntBASIC6.61□□□□□ -1.35
CD44P16070 AC011276.1-201ENST00000469688 323 ntBASIC6.61□□□□□ -1.35
CD44P16070 AC091179.3-201ENST00000474761 144 ntBASIC6.61□□□□□ -1.35
CD44P16070 RNU6-1095P-201ENST00000516148 108 ntBASIC6.61□□□□□ -1.35
CD44P16070 RNU6-197P-201ENST00000516680 100 ntBASIC6.61□□□□□ -1.35
CD44P16070 AC126615.2-201ENST00000553003 515 ntBASIC6.61□□□□□ -1.35
CD44P16070 AC021231.3-201ENST00000558497 370 ntBASIC6.61□□□□□ -1.35
CD44P16070 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CD44P16070 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD44P16070 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CD44P16070 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.61□□□□□ -1.35
CD44P16070 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.61□□□□□ -1.35
CD44P16070 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms