Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC010285.1-201ENST00000470580 392 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 RNA5SP471-201ENST00000516971 106 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 AP004247.1-201ENST00000531556 1289 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 MIR4714-201ENST00000580728 77 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 RNA5SP108-201ENST00000605921 117 ntBASIC1.71□□□□□ -2.14
TOP2AP11388 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.71□□□□□ -2.14
TOP2AP11388 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TOP2AP11388 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.7□□□□□ -2.14
TOP2AP11388 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.7□□□□□ -2.14
TOP2AP11388 TPRKBP1-201ENST00000456243 481 ntBASIC1.7□□□□□ -2.14
TOP2AP11388 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.7□□□□□ -2.14
TOP2AP11388 HSBP1P1-201ENST00000555205 166 ntBASIC1.7□□□□□ -2.14
TOP2AP11388 AL442644.1-201ENST00000454390 3105 ntBASIC1.7□□□□□ -2.14
TOP2AP11388 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TOP2AP11388 RNU6-1077P-201ENST00000410506 102 ntBASIC1.69□□□□□ -2.14
TOP2AP11388 AC096533.1-201ENST00000411645 353 ntBASIC1.69□□□□□ -2.14
TOP2AP11388 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.69□□□□□ -2.14
TOP2AP11388 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.69□□□□□ -2.14
TOP2AP11388 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.69□□□□□ -2.14
TOP2AP11388 AC135178.6-201ENST00000605314 398 ntBASIC1.69□□□□□ -2.14
TOP2AP11388 AL390240.1-201ENST00000612950 384 ntBASIC1.69□□□□□ -2.14
TOP2AP11388 AL449363.1-201ENST00000617815 186 ntBASIC1.69□□□□□ -2.14
TOP2AP11388 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
TOP2AP11388 AL512504.1-201ENST00000415494 778 ntBASIC1.68□□□□□ -2.14
TOP2AP11388 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.68□□□□□ -2.14
TOP2AP11388 CASP3P1-201ENST00000446037 609 ntBASIC1.68□□□□□ -2.14
TOP2AP11388 OR9N1P-202ENST00000494289 481 ntBASIC1.68□□□□□ -2.14
TOP2AP11388 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.68□□□□□ -2.14
TOP2AP11388 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.68□□□□□ -2.14
TOP2AP11388 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TOP2AP11388 MIR98-201ENST00000606724 119 ntBASIC1.68□□□□□ -2.14
TOP2AP11388 RNU4-41P-201ENST00000364426 143 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 SNORA14A-201ENST00000364773 135 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 MIR607-201ENST00000385241 96 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 RPS23P4-201ENST00000487908 423 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 RNU1-61P-201ENST00000516107 151 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.67□□□□□ -2.14
TOP2AP11388 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.67□□□□□ -2.14
TOP2AP11388 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 AC126118.1-201ENST00000607744 628 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 MIR6857-201ENST00000613267 93 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 AC091812.1-201ENST00000432235 1948 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 AC007342.9-201ENST00000623877 1385 ntBASIC1.67□□□□□ -2.14
TOP2AP11388 MIR17-201ENST00000385012 84 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 TPMTP3-201ENST00000411928 735 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 RFC5P1-201ENST00000454419 874 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 SNORD97-201ENST00000459187 142 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AC105252.1-201ENST00000503089 286 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 PCNAP1-201ENST00000505363 709 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 MTND3P24-201ENST00000506306 329 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.66□□□□□ -2.14
TOP2AP11388 GLYCAM1-201ENST00000546596 285 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AC005730.3-201ENST00000583067 366 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 FAM71BP1-201ENST00000604431 523 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AC010889.1-201ENST00000566193 2666 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 Y_RNA.374-201ENST00000365606 101 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.66□□□□□ -2.14
TOP2AP11388 AC079148.1-201ENST00000565944 819 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
TOP2AP11388 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.65□□□□□ -2.14
TOP2AP11388 RNU11-5P-201ENST00000391216 129 ntBASIC1.65□□□□□ -2.15
TOP2AP11388 RNU2-71P-201ENST00000411395 189 ntBASIC1.65□□□□□ -2.15
TOP2AP11388 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.65□□□□□ -2.15
TOP2AP11388 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.65□□□□□ -2.15
TOP2AP11388 AC008749.1-201ENST00000597650 306 ntBASIC1.65□□□□□ -2.15
TOP2AP11388 U73023.1-201ENST00000603134 700 ntBASIC1.65□□□□□ -2.15
TOP2AP11388 AC099654.7-201ENST00000635788 2127 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 U8.3-201ENST00000363321 132 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 AP002784.2-201ENST00000397300 549 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 AC008850.1-201ENST00000427546 362 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.64□□□□□ -2.15
TOP2AP11388 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.64□□□□□ -2.15
TOP2AP11388 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 MTCO2P32-201ENST00000514865 403 ntBASIC1.64□□□□□ -2.15
TOP2AP11388 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.64□□□□□ -2.15
TOP2AP11388 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.64□□□□□ -2.15
TOP2AP11388 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.64□□□□□ -2.15
TOP2AP11388 PTGES3P2-201ENST00000407942 482 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.63□□□□□ -2.15
TOP2AP11388 AC234781.2-201ENST00000426370 994 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 AL591212.2-201ENST00000433923 257 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 ARF4P4-201ENST00000439608 520 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 AC020699.1-201ENST00000505161 445 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 AC022880.1-201ENST00000534017 973 ntBASIC1.63□□□□□ -2.15
TOP2AP11388 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
TOP2AP11388 SNORA51.2-201ENST00000364595 132 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 ERHP2-201ENST00000402323 299 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 RPL21P103-201ENST00000479921 488 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 OR5BM1P-201ENST00000512021 366 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 AL121821.2-201ENST00000556081 394 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 AL135786.2-201ENST00000608422 615 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 AC068831.7-201ENST00000616954 363 ntBASIC1.62□□□□□ -2.15
TOP2AP11388 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
TOP2AP11388 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
TOP2AP11388 RNU6-1263P-201ENST00000384601 106 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 RPL21P90-201ENST00000415692 466 ntBASIC1.61□□□□□ -2.15
TOP2AP11388 AC073464.3-201ENST00000422564 712 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms