Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC135628.1-201ENST00000568867 534 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 AC006130.2-201ENST00000586202 326 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB1P09429 MTND5P42-201ENST00000637720 498 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 OR6C71P-202ENST00000641886 1107 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB1P09429 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB1P09429 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB1P09429 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
HMGB1P09429 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.34□□□□□ -1.71
HMGB1P09429 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGB1P09429 MT-TH-201ENST00000387441 69 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AL391417.1-201ENST00000404100 426 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 RPL5P18-201ENST00000406671 891 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 SNORA57.3-201ENST00000411095 141 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 RPL7P2-201ENST00000427639 268 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AL445567.1-201ENST00000439121 144 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 RPS29P7-201ENST00000439662 171 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC098831.1-201ENST00000440661 216 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGB1P09429 AC008264.1-201ENST00000447612 367 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 RPS27P29-201ENST00000463110 252 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 ACTR3P3-201ENST00000480448 893 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGB1P09429 AC026402.1-201ENST00000513642 170 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.34□□□□□ -1.71
HMGB1P09429 SCARNA17.1-201ENST00000516211 143 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 SCARNA17.2-201ENST00000516334 143 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AP003467.2-201ENST00000520175 319 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.34□□□□□ -1.71
HMGB1P09429 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGB1P09429 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGB1P09429 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HMGB1P09429 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.34□□□□□ -1.71
HMGB1P09429 BNIP3P8-201ENST00000597863 560 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC073544.2-201ENST00000601155 540 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AF131215.7-201ENST00000602443 707 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC022893.3-201ENST00000607665 437 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 SCARNA17.4-201ENST00000614296 143 ntBASIC4.34□□□□□ -1.71
HMGB1P09429 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.34□□□□□ -1.72
HMGB1P09429 AC010889.1-201ENST00000566193 2666 ntBASIC4.34□□□□□ -1.72
HMGB1P09429 RNU5E-1-201ENST00000362477 120 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RNU6-190P-201ENST00000384154 102 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P75-201ENST00000396599 483 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P28-201ENST00000401418 483 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AL592114.1-201ENST00000403842 483 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HMGB1P09429 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGB1P09429 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGB1P09429 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P39-201ENST00000463605 483 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P93-201ENST00000480465 489 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC087190.1-201ENST00000484462 480 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC093591.1-201ENST00000491435 481 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P129-201ENST00000491732 478 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RPL21P16-201ENST00000495531 483 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB1P09429 AC098862.1-201ENST00000504991 413 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB1P09429 AC098591.2-201ENST00000510152 315 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 RNU6-579P-201ENST00000516879 102 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC008011.1-201ENST00000545989 227 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.33□□□□□ -1.72
HMGB1P09429 AC009977.1-201ENST00000586015 570 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 VN1R85P-201ENST00000601587 426 ntBASIC4.33□□□□□ -1.72
HMGB1P09429 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.33□□□□□ -1.72
HMGB1P09429 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB1P09429 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMGB1P09429 AC093010.3-201ENST00000570269 15214 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB1P09429 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HMGB1P09429 NACAP2-201ENST00000318548 624 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 RNU6-960P-201ENST00000364056 120 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 RNA5SP515-201ENST00000364570 118 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AL031121.1-201ENST00000406553 254 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AC092809.3-201ENST00000415453 231 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB1P09429 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB1P09429 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC097262.1-201ENST00000452559 548 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AC233279.1-201ENST00000455300 423 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AC068587.1-201ENST00000483613 781 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HMGB1P09429 AL121576.1-201ENST00000556055 276 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.32□□□□□ -1.72
HMGB1P09429 AC245389.1-201ENST00000605141 529 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 AC244100.1-202ENST00000621554 382 ntBASIC4.32□□□□□ -1.72
HMGB1P09429 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB1P09429 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HMGB1P09429 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMGB1P09429 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HMGB1P09429 AL137003.2-201ENST00000606924 2538 ntBASIC4.31□□□□□ -1.72
HMGB1P09429 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms