Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC090970.3-201ENST00000612566 866 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC009159.1-201ENST00000618386 642 ntBASIC3.06□□□□□ -1.92
VIMP08670 AF246928.1-201ENST00000623768 87 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC120349.3-201ENST00000624377 529 ntBASIC3.06□□□□□ -1.92
VIMP08670 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.06□□□□□ -1.92
VIMP08670 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VIMP08670 AP003122.5-201ENST00000527668 3766 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL355596.1-201ENST00000565399 3996 ntBASIC3.05□□□□□ -1.92
VIMP08670 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VIMP08670 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.05□□□□□ -1.92
VIMP08670 OR1S2-201ENST00000302592 978 ntBASIC3.05□□□□□ -1.92
VIMP08670 RPL9P7-201ENST00000330965 580 ntBASIC3.05□□□□□ -1.92
VIMP08670 VTRNA1-1-201ENST00000363120 99 ntBASIC3.05□□□□□ -1.92
VIMP08670 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
VIMP08670 FO393413.1-201ENST00000402892 195 ntBASIC3.05□□□□□ -1.92
VIMP08670 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
VIMP08670 AC099548.1-201ENST00000421443 426 ntBASIC3.05□□□□□ -1.92
VIMP08670 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.05□□□□□ -1.92
VIMP08670 AC244035.1-201ENST00000430042 390 ntBASIC3.05□□□□□ -1.92
VIMP08670 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.05□□□□□ -1.92
VIMP08670 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.05□□□□□ -1.92
VIMP08670 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.05□□□□□ -1.92
VIMP08670 RPL22P17-201ENST00000438729 315 ntBASIC3.05□□□□□ -1.92
VIMP08670 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.05□□□□□ -1.92
VIMP08670 RPS3AP43-201ENST00000479743 781 ntBASIC3.05□□□□□ -1.92
VIMP08670 RPL9P33-201ENST00000484311 566 ntBASIC3.05□□□□□ -1.92
VIMP08670 SEM1P1-201ENST00000506694 209 ntBASIC3.05□□□□□ -1.92
VIMP08670 MTND1P22-201ENST00000510572 951 ntBASIC3.05□□□□□ -1.92
VIMP08670 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.05□□□□□ -1.92
VIMP08670 MTND5P13-201ENST00000513046 1079 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC114797.1-201ENST00000514003 728 ntBASIC3.05□□□□□ -1.92
VIMP08670 RNU6-201P-201ENST00000517100 61 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC025881.1-201ENST00000518851 512 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC100870.1-201ENST00000522035 505 ntBASIC3.05□□□□□ -1.92
VIMP08670 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.05□□□□□ -1.92
VIMP08670 ZNF519P3-201ENST00000557158 1032 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC034105.3-201ENST00000565294 442 ntBASIC3.05□□□□□ -1.92
VIMP08670 MIR3146-201ENST00000580367 79 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.05□□□□□ -1.92
VIMP08670 NIFKP6-201ENST00000598115 845 ntBASIC3.05□□□□□ -1.92
VIMP08670 WISP1-OT1-201ENST00000602893 642 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
VIMP08670 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.05□□□□□ -1.92
VIMP08670 AC122133.1-201ENST00000613964 233 ntBASIC3.05□□□□□ -1.92
VIMP08670 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC073308.1-201ENST00000623696 305 ntBASIC3.05□□□□□ -1.92
VIMP08670 AC010680.1-201ENST00000590024 3590 ntBASIC3.05□□□□□ -1.92
VIMP08670 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VIMP08670 ZNF833P-201ENST00000424938 1494 ntBASIC3.04□□□□□ -1.92
VIMP08670 ASNSP3-201ENST00000451989 1306 ntBASIC3.04□□□□□ -1.92
VIMP08670 RNU5F-7P-201ENST00000363696 115 ntBASIC3.04□□□□□ -1.92
VIMP08670 RNA5SP50-201ENST00000363731 107 ntBASIC3.04□□□□□ -1.92
VIMP08670 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.04□□□□□ -1.92
VIMP08670 SNORA5A-201ENST00000384111 134 ntBASIC3.04□□□□□ -1.92
VIMP08670 RNU6-533P-201ENST00000384144 107 ntBASIC3.04□□□□□ -1.92
VIMP08670 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VIMP08670 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIMP08670 CYCSP19-201ENST00000411715 316 ntBASIC3.04□□□□□ -1.92
VIMP08670 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
VIMP08670 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.04□□□□□ -1.92
VIMP08670 AL365203.2-201ENST00000423444 196 ntBASIC3.04□□□□□ -1.92
VIMP08670 AL353777.1-201ENST00000425552 326 ntBASIC3.04□□□□□ -1.92
VIMP08670 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.04□□□□□ -1.92
VIMP08670 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.04□□□□□ -1.92
VIMP08670 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.04□□□□□ -1.92
VIMP08670 HSPD1P21-201ENST00000436541 245 ntBASIC3.04□□□□□ -1.92
VIMP08670 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.04□□□□□ -1.92
VIMP08670 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.04□□□□□ -1.92
VIMP08670 RPL21P23-201ENST00000446654 460 ntBASIC3.04□□□□□ -1.92
VIMP08670 RBMY2UP-201ENST00000453474 324 ntBASIC3.04□□□□□ -1.92
VIMP08670 RPL21P10-201ENST00000463521 490 ntBASIC3.04□□□□□ -1.92
VIMP08670 AC008571.1-201ENST00000467232 300 ntBASIC3.04□□□□□ -1.92
VIMP08670 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
VIMP08670 AC106707.2-201ENST00000484182 374 ntBASIC3.04□□□□□ -1.92
VIMP08670 AIG1P1-201ENST00000503376 148 ntBASIC3.04□□□□□ -1.92
VIMP08670 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.04□□□□□ -1.92
VIMP08670 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.04□□□□□ -1.92
VIMP08670 AC104619.4-201ENST00000510773 249 ntBASIC3.04□□□□□ -1.92
VIMP08670 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.04□□□□□ -1.92
VIMP08670 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.04□□□□□ -1.92
VIMP08670 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.04□□□□□ -1.92
VIMP08670 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.04□□□□□ -1.92
VIMP08670 KC877982.1-201ENST00000602313 470 ntBASIC3.04□□□□□ -1.92
VIMP08670 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIMP08670 AL161629.2-201ENST00000615347 275 ntBASIC3.04□□□□□ -1.92
VIMP08670 AC027807.2-201ENST00000616099 408 ntBASIC3.04□□□□□ -1.92
VIMP08670 AC104010.1-201ENST00000616889 150 ntBASIC3.04□□□□□ -1.92
VIMP08670 AP003485.2-201ENST00000623636 610 ntBASIC3.04□□□□□ -1.92
VIMP08670 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VIMP08670 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VIMP08670 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VIMP08670 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIMP08670 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIMP08670 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIMP08670 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VIMP08670 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.03□□□□□ -1.92
VIMP08670 RNU6-217P-201ENST00000384164 104 ntBASIC3.03□□□□□ -1.92
VIMP08670 RNU5A-2P-201ENST00000384337 116 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms