Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR422A-201ENST00000362286 90 ntBASIC3.64□□□□□ -1.83
MMP3P08254 RNA5SP322-201ENST00000363617 119 ntBASIC3.64□□□□□ -1.83
MMP3P08254 RNA5SP167-201ENST00000365461 116 ntBASIC3.64□□□□□ -1.83
MMP3P08254 Y_RNA.409-201ENST00000383990 98 ntBASIC3.64□□□□□ -1.83
MMP3P08254 MIR135A2-201ENST00000384854 100 ntBASIC3.64□□□□□ -1.83
MMP3P08254 RNU4-55P-201ENST00000410731 137 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.64□□□□□ -1.83
MMP3P08254 AC079780.1-201ENST00000428259 207 ntBASIC3.64□□□□□ -1.83
MMP3P08254 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.64□□□□□ -1.83
MMP3P08254 TIMM9P1-201ENST00000436122 256 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.64□□□□□ -1.83
MMP3P08254 Z99127.3-201ENST00000448158 395 ntBASIC3.64□□□□□ -1.83
MMP3P08254 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
MMP3P08254 RPL23AP41-201ENST00000484754 458 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
MMP3P08254 FCF1P3-201ENST00000496394 590 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC114967.1-201ENST00000504890 259 ntBASIC3.64□□□□□ -1.83
MMP3P08254 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
MMP3P08254 AC011352.1-201ENST00000512300 793 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC114797.1-201ENST00000514003 728 ntBASIC3.64□□□□□ -1.83
MMP3P08254 Vault.3-201ENST00000516676 95 ntBASIC3.64□□□□□ -1.83
MMP3P08254 RNA5SP337-201ENST00000517007 109 ntBASIC3.64□□□□□ -1.83
MMP3P08254 NARSP2-201ENST00000518524 679 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC107934.2-201ENST00000518653 310 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.64□□□□□ -1.83
MMP3P08254 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 SETP2-201ENST00000553886 926 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
MMP3P08254 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.64□□□□□ -1.83
MMP3P08254 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.64□□□□□ -1.83
MMP3P08254 COX6CP3-201ENST00000580869 223 ntBASIC3.64□□□□□ -1.83
MMP3P08254 NRBF2P1-201ENST00000587407 859 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC245014.2-201ENST00000603689 287 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AP000860.1-201ENST00000605250 559 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC246785.4-201ENST00000605374 287 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC007038.2-201ENST00000608095 740 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC090970.3-201ENST00000612566 866 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.64□□□□□ -1.83
MMP3P08254 CR381653.2-201ENST00000624041 768 ntBASIC3.64□□□□□ -1.83
MMP3P08254 AC124864.2-201ENST00000624736 186 ntBASIC3.64□□□□□ -1.83
MMP3P08254 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
MMP3P08254 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 ZNF807-201ENST00000328088 1707 ntBASIC3.64□□□□□ -1.83
MMP3P08254 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
MMP3P08254 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 AC017071.1-201ENST00000564407 2204 ntBASIC3.63□□□□□ -1.83
MMP3P08254 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.63□□□□□ -1.83
MMP3P08254 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 AC244517.1-201ENST00000606030 2086 ntBASIC3.63□□□□□ -1.83
MMP3P08254 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 RNU5A-8P-201ENST00000364102 114 ntBASIC3.63□□□□□ -1.83
MMP3P08254 RNY3P13-201ENST00000365542 102 ntBASIC3.63□□□□□ -1.83
MMP3P08254 SNORA20.2-201ENST00000383922 131 ntBASIC3.63□□□□□ -1.83
MMP3P08254 Y_RNA.510-201ENST00000384511 114 ntBASIC3.63□□□□□ -1.83
MMP3P08254 RNU6-837P-201ENST00000391056 108 ntBASIC3.63□□□□□ -1.83
MMP3P08254 CALM2P3-201ENST00000400429 449 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL136116.1-201ENST00000403591 381 ntBASIC3.63□□□□□ -1.83
MMP3P08254 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.63□□□□□ -1.83
MMP3P08254 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 MTND3P17-201ENST00000416968 344 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.63□□□□□ -1.83
MMP3P08254 COTL1P1-201ENST00000422309 375 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 AC133104.1-201ENST00000429100 218 ntBASIC3.63□□□□□ -1.83
MMP3P08254 RPL23AP69-201ENST00000431134 458 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL139415.2-201ENST00000431968 163 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.63□□□□□ -1.83
MMP3P08254 AL359385.1-201ENST00000456509 365 ntBASIC3.63□□□□□ -1.83
MMP3P08254 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MMP3P08254 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 KCTD9P5-201ENST00000504141 1170 ntBASIC3.63□□□□□ -1.83
MMP3P08254 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.63□□□□□ -1.83
MMP3P08254 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 AL121603.1-201ENST00000553815 142 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.63□□□□□ -1.83
MMP3P08254 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.63□□□□□ -1.83
MMP3P08254 MIR3167-201ENST00000579623 85 ntBASIC3.63□□□□□ -1.83
MMP3P08254 MIR2682-201ENST00000580305 110 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AC103710.3-201ENST00000608157 948 ntBASIC3.63□□□□□ -1.83
MMP3P08254 SNORD39.4-201ENST00000620099 78 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AC018692.3-201ENST00000623929 123 ntBASIC3.63□□□□□ -1.83
MMP3P08254 AL136313.1-201ENST00000624804 202 ntBASIC3.63□□□□□ -1.83
MMP3P08254 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 261.7 ms