Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC138853.1-201ENST00000503549 823 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.79□□□□□ -1.96
SFTPBP07988 AF131216.2-201ENST00000512316 564 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 RNU1-143P-201ENST00000516296 146 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 RNU6-1003P-201ENST00000517099 105 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 MTND4LP18-201ENST00000526864 291 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.79□□□□□ -1.96
SFTPBP07988 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SFTPBP07988 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SFTPBP07988 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.79□□□□□ -1.96
SFTPBP07988 AC008015.1-201ENST00000555505 465 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.79□□□□□ -1.96
SFTPBP07988 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
SFTPBP07988 MIR4276-201ENST00000584832 70 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 U73023.1-201ENST00000603134 700 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC136601.2-201ENST00000604356 474 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AL162713.1-201ENST00000604480 262 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC103710.1-201ENST00000610003 901 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AL355816.2-201ENST00000610049 647 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 U1.23-201ENST00000610293 146 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC090970.3-201ENST00000612566 866 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 RNU1-68P-201ENST00000615382 146 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 U1.39-201ENST00000621562 146 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.79□□□□□ -1.96
SFTPBP07988 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SFTPBP07988 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SFTPBP07988 AC010680.1-201ENST00000590024 3590 ntBASIC2.79□□□□□ -1.96
SFTPBP07988 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SFTPBP07988 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.78□□□□□ -1.96
SFTPBP07988 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
SFTPBP07988 AP000568.1-201ENST00000282964 442 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RNY4P24-201ENST00000362735 96 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RNU6-140P-201ENST00000384566 108 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 MTCYBP36-201ENST00000404146 440 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RPL7P25-201ENST00000404151 721 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RNA5SP229-201ENST00000410809 99 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.78□□□□□ -1.96
SFTPBP07988 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.78□□□□□ -1.96
SFTPBP07988 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 FCF1P1-201ENST00000432690 571 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.78□□□□□ -1.96
SFTPBP07988 AC118469.1-201ENST00000442943 488 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 AC115115.1-201ENST00000449927 248 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 RPS29P2-201ENST00000479278 136 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SFTPBP07988 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 RN7SKP57-201ENST00000517248 293 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SFTPBP07988 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.78□□□□□ -1.96
SFTPBP07988 PCMTD1P2-201ENST00000565017 355 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC091489.2-201ENST00000566263 604 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC006504.3-201ENST00000586818 523 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AP001981.2-201ENST00000603241 418 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AL161729.4-201ENST00000604650 476 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 Z99289.3-201ENST00000605586 594 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC018638.7-201ENST00000605836 1114 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.78□□□□□ -1.96
SFTPBP07988 AC009159.1-201ENST00000618386 642 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.78□□□□□ -1.96
SFTPBP07988 MIR3651-201ENST00000630427 90 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC093591.3-201ENST00000634516 308 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AC006927.3-201ENST00000638789 384 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 PABPC1P9-201ENST00000426076 1612 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 AL365361.1-201ENST00000566942 3481 ntBASIC2.78□□□□□ -1.96
SFTPBP07988 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SFTPBP07988 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.77□□□□□ -1.97
SFTPBP07988 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.77□□□□□ -1.97
SFTPBP07988 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SFTPBP07988 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SFTPBP07988 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.77□□□□□ -1.97
SFTPBP07988 GNG5P1-201ENST00000255500 204 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 RPL21P3-201ENST00000395517 478 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.77□□□□□ -1.97
SFTPBP07988 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.77□□□□□ -1.97
SFTPBP07988 MTND5P25-201ENST00000430499 799 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.77□□□□□ -1.97
SFTPBP07988 RPL22P17-201ENST00000438729 315 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AL512286.1-201ENST00000439244 400 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 RPL23AP58-201ENST00000440453 469 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.77□□□□□ -1.97
SFTPBP07988 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.77□□□□□ -1.97
SFTPBP07988 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.77□□□□□ -1.97
SFTPBP07988 AC146507.2-201ENST00000460608 476 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 RPL21P13-201ENST00000488305 481 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.77□□□□□ -1.97
SFTPBP07988 RNA5SP290-201ENST00000517133 127 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.77□□□□□ -1.97
SFTPBP07988 AC100870.1-201ENST00000522035 505 ntBASIC2.77□□□□□ -1.97
SFTPBP07988 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms