Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RPL9P33-201ENST00000484311 566 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 MTCYBP17-201ENST00000503579 789 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC109927.2-201ENST00000506416 303 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.2□□□□□ -1.9
COL5A2P05997 CDC42P4-201ENST00000510507 563 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC011352.1-201ENST00000512300 793 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 RNA5SP135-201ENST00000517019 125 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A2P05997 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.2□□□□□ -1.9
COL5A2P05997 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.2□□□□□ -1.9
COL5A2P05997 AC074051.3-201ENST00000570238 358 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 RBM11P1-201ENST00000604951 799 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC024560.3-201ENST00000608482 349 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AC025588.4-201ENST00000615802 908 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 AL359740.1-201ENST00000624340 592 ntBASIC3.2□□□□□ -1.9
COL5A2P05997 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.2□□□□□ -1.9
COL5A2P05997 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL5A2P05997 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL5A2P05997 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COL5A2P05997 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A2P05997 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
COL5A2P05997 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A2P05997 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A2P05997 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A2P05997 RNU6-621P-201ENST00000364752 109 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
COL5A2P05997 RNA5SP210-201ENST00000391034 120 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC048351.1-201ENST00000420064 602 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.19□□□□□ -1.9
COL5A2P05997 MTATP6P13-201ENST00000438531 667 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A2P05997 AC104389.3-201ENST00000445629 235 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.19□□□□□ -1.9
COL5A2P05997 NDUFA5P7-201ENST00000452914 242 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 MTCYBP1-201ENST00000454315 1119 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC093899.1-201ENST00000457984 376 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 RPS27AP9-201ENST00000477681 438 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC126182.1-201ENST00000478134 357 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.19□□□□□ -1.9
COL5A2P05997 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
COL5A2P05997 AC091805.2-201ENST00000603848 235 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC012360.2-201ENST00000609349 391 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 MIR7844-201ENST00000616161 122 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 U6.98-201ENST00000637157 84 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A2P05997 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
COL5A2P05997 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL5A2P05997 AC092447.7-201ENST00000422212 1621 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 AC005832.2-201ENST00000538921 1430 ntBASIC3.19□□□□□ -1.9
COL5A2P05997 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
COL5A2P05997 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL5A2P05997 MTND4P16-201ENST00000466108 1367 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 AC016716.1-201ENST00000265882 708 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL5A2P05997 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 SNORA75-201ENST00000384158 137 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MTCO3P31-201ENST00000405526 789 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COL5A2P05997 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 AC234782.4-201ENST00000417646 1048 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MTCO3P1-205ENST00000422088 832 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MTND4LP11-201ENST00000422184 280 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MTCYBP5-201ENST00000423752 1135 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.18□□□□□ -1.9
COL5A2P05997 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.18□□□□□ -1.9
COL5A2P05997 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.18□□□□□ -1.9
COL5A2P05997 SUMO2P2-201ENST00000456482 255 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 HMGN2P23-201ENST00000456759 269 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 CEACAMP4-201ENST00000457676 421 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.18□□□□□ -1.9
COL5A2P05997 HMGB1P28-201ENST00000507778 552 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 RNU6-405P-201ENST00000516637 110 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.18□□□□□ -1.9
COL5A2P05997 AC074029.1-201ENST00000552531 1044 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.18□□□□□ -1.9
COL5A2P05997 AC123786.2-201ENST00000603459 275 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC025594.3-201ENST00000613068 790 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC013476.2-201ENST00000614456 459 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC027807.2-201ENST00000616099 408 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC123768.4-201ENST00000616244 701 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AC092650.2-201ENST00000619984 902 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 AC006927.3-201ENST00000638789 384 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 MKKS-204ENST00000639674 192 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.18□□□□□ -1.9
COL5A2P05997 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL5A2P05997 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
COL5A2P05997 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
COL5A2P05997 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL5A2P05997 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
COL5A2P05997 CDR1-202ENST00000625883 1485 ntBASIC3.18□□□□□ -1.9
COL5A2P05997 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms