Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HLA-DQB2P05538 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
HLA-DQB2P05538 HSPE1P11-201ENST00000339579 310 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 RNU6-650P-201ENST00000365658 111 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 MIR217-201ENST00000384817 110 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 Z85995.1-201ENST00000415547 335 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 SPA17P1-201ENST00000416656 452 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL512844.2-201ENST00000433990 593 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 IFNA11P-201ENST00000446352 526 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 RPL7P55-201ENST00000450522 746 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 MTND4LP3-201ENST00000468320 276 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC068587.2-201ENST00000478386 781 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC091860.1-201ENST00000505723 432 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 RNU6-1282P-201ENST00000516735 96 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 HMGN1P28-201ENST00000521340 364 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 MIR4666A-201ENST00000580160 79 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC091946.2-201ENST00000606105 291 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AC009318.2-201ENST00000610917 651 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
HLA-DQB2P05538 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DQB2P05538 AL049641.1-201ENST00000441055 1948 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AC009902.3-201ENST00000606235 2172 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 MTND4P21-201ENST00000453886 1357 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 MIR325-201ENST00000385260 98 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AL035405.1-201ENST00000400795 710 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 RNU2-28P-201ENST00000410457 189 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AL513331.1-201ENST00000411908 397 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 TAF13P2-201ENST00000416876 286 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 OOSP1P1-201ENST00000423265 274 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 THAP5P1-201ENST00000439089 262 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 BMI1P1-201ENST00000445879 941 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 COX6CP12-201ENST00000446748 202 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 TPRKBP1-201ENST00000456243 481 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 RNU7-26P-201ENST00000458980 63 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 KLRA1P-201ENST00000503499 986 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 MTND4P2-201ENST00000507767 1203 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 SNORA31.22-201ENST00000517204 135 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 ATP5F1P5-201ENST00000526403 760 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AC068790.3-201ENST00000602988 553 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AP002906.1-201ENST00000603405 233 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 TUG1_1.1-201ENST00000610654 145 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AL592148.2-201ENST00000612210 372 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AC093838.1-201ENST00000613014 469 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AL590099.1-201ENST00000615276 138 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 HMGB1P24-202ENST00000615653 685 ntBASIC1.89□□□□□ -2.11
HLA-DQB2P05538 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DQB2P05538 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 NPM1P11-201ENST00000417106 855 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 GXYLT1P1-201ENST00000446657 490 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AL353691.1-201ENST00000451332 387 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC092757.1-201ENST00000467293 467 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC013828.1-201ENST00000481845 158 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 NDUFB4P2-201ENST00000509515 391 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC093510.2-201ENST00000562820 896 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 RPS15AP11-201ENST00000594193 385 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AL022067.1-201ENST00000602426 454 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC103710.4-201ENST00000609301 899 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AC245884.12-201ENST00000615364 59 ntBASIC1.88□□□□□ -2.11
HLA-DQB2P05538 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HLA-DQB2P05538 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms