Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.07□□□□□ -2.24
SPTA1P02549 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.07□□□□□ -2.24
SPTA1P02549 RNA5SP189-201ENST00000364920 115 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 LINC01347-201ENST00000417964 355 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.06□□□□□ -2.24
SPTA1P02549 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.06□□□□□ -2.24
SPTA1P02549 GTF2IP12-201ENST00000456547 356 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 RPS27AP10-201ENST00000496103 208 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 HMGB3P3-201ENST00000510526 400 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AC074029.2-201ENST00000551045 634 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.06□□□□□ -2.24
SPTA1P02549 AC010735.1-201ENST00000567305 1026 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AC123912.5-201ENST00000605470 343 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AC080100.1-201ENST00000624239 5356 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SPTA1P02549 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SPTA1P02549 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SPTA1P02549 PGBD4P3-201ENST00000440731 581 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.06□□□□□ -2.24
SPTA1P02549 RNU6-347P-201ENST00000516658 105 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.06□□□□□ -2.24
SPTA1P02549 AC011468.4-201ENST00000603942 409 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 BNIP3P7-201ENST00000605641 516 ntBASIC1.06□□□□□ -2.24
SPTA1P02549 RNU6-799P-201ENST00000363567 107 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.05□□□□□ -2.24
SPTA1P02549 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.05□□□□□ -2.24
SPTA1P02549 AL596276.1-201ENST00000434465 418 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 IFNA20P-201ENST00000436840 528 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 HSPE1P22-201ENST00000456856 327 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AP003072.2-201ENST00000527756 676 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 YWHAQP7-201ENST00000603536 658 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 DUXAP9-208ENST00000622815 614 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AC004943.3-201ENST00000624116 600 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTA1P02549 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
SPTA1P02549 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTA1P02549 DEFB108F-201ENST00000344638 222 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AL591034.1-201ENST00000407447 340 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTA1P02549 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTA1P02549 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTA1P02549 AC023050.1-201ENST00000498198 304 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTA1P02549 MTND4LP5-201ENST00000605152 292 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AC211469.2-201ENST00000605461 205 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AC067838.1-201ENST00000606064 577 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 MTND5P9-201ENST00000503854 1755 ntBASIC1.05□□□□□ -2.24
SPTA1P02549 AP000648.3-201ENST00000623539 4507 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTA1P02549 RPS6P14-201ENST00000425165 719 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTA1P02549 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTA1P02549 RBM43P1-201ENST00000476891 1081 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 AC010625.1-201ENST00000511296 403 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTA1P02549 AC010928.2-201ENST00000588017 287 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
SPTA1P02549 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPTA1P02549 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPTA1P02549 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTA1P02549 AC234064.1-201ENST00000436312 247 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTA1P02549 AC023790.1-201ENST00000482174 347 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 MTND2P17-201ENST00000550281 688 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTA1P02549 ANP32BP3-201ENST00000559213 706 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SPTA1P02549 AC090517.3-201ENST00000625170 141 ntBASIC1.04□□□□□ -2.24
SPTA1P02549 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SPTA1P02549 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.04□□□□□ -2.24
SPTA1P02549 AL354685.2-201ENST00000448218 1447 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SPTA1P02549 Y_RNA.280-201ENST00000364765 112 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 RNA5SP331-201ENST00000364986 107 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 AC098592.2-201ENST00000413158 265 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTA1P02549 AC016691.1-201ENST00000441321 413 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 RPL23AP41-201ENST00000484754 458 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTA1P02549 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.03□□□□□ -2.24
SPTA1P02549 MIR8087-201ENST00000612745 78 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 AC004808.1-201ENST00000627671 721 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 RLIMP2-201ENST00000427891 1563 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 AL359851.1-201ENST00000569460 4997 ntBASIC1.03□□□□□ -2.24
SPTA1P02549 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
SPTA1P02549 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
SPTA1P02549 AC009302.1-201ENST00000417147 390 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 SUMO1P4-201ENST00000429430 302 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 PSMA2P3-201ENST00000429685 675 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.03□□□□□ -2.25
SPTA1P02549 AL353898.1-201ENST00000444055 238 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 AL136380.1-201ENST00000447970 162 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 RNA5SP233-201ENST00000459153 113 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 RPL9P9-202ENST00000466501 579 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.03□□□□□ -2.25
SPTA1P02549 AC118942.1-201ENST00000529674 1035 ntBASIC1.03□□□□□ -2.25
SPTA1P02549 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms