Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 HMGB1P14-201ENST00000557424 591 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC090888.1-201ENST00000561335 1141 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AF038458.1-201ENST00000588406 262 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 VN1R92P-201ENST00000598511 928 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL049779.4-201ENST00000604500 156 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC008277.2-201ENST00000605196 797 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 BCRP9-201ENST00000605312 388 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC013244.3-201ENST00000605614 388 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC093838.1-201ENST00000613014 469 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC013476.2-201ENST00000614456 459 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC018692.3-201ENST00000623929 123 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC110079.1-202ENST00000635213 138 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 AC010680.1-201ENST00000590024 3590 ntBASIC2.05□□□□□ -2.08
HLA-DQA1P01909 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HLA-DQA1P01909 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 RNU6-1200P-201ENST00000384162 107 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 HMGN2P30-201ENST00000423237 256 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 PIGFP3-201ENST00000441918 722 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MTATP6P30-201ENST00000443540 664 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 OR6C5P-201ENST00000452388 923 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC006445.1-201ENST00000491925 405 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC034244.1-201ENST00000507687 207 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC117522.3-201ENST00000507974 584 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 LTV1P1-201ENST00000510683 1237 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC009812.2-201ENST00000517657 457 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MRPS36P3-201ENST00000519284 130 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 HMGN1P28-201ENST00000521340 364 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC013828.2-201ENST00000532487 235 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC123904.3-201ENST00000547218 814 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AL365361.1-201ENST00000566942 3481 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MIR5092-201ENST00000583139 88 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 BNIP3P23-201ENST00000599655 511 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 RPL23AP78-201ENST00000599928 470 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 U73023.1-201ENST00000603134 700 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AC021171.1-201ENST00000603137 706 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AP002782.1-201ENST00000623107 614 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 AP000676.3-201ENST00000623299 569 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MIR3651-201ENST00000630427 90 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MIR4275-201ENST00000636486 87 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 MTND1P37-201ENST00000636562 264 ntBASIC2.04□□□□□ -2.08
HLA-DQA1P01909 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC092125.1-201ENST00000562568 1995 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 AC138915.1-201ENST00000565427 1685 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 MTND4P16-201ENST00000466108 1367 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HLA-DQA1P01909 SNORA71.1-201ENST00000364523 117 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 RNU6-769P-201ENST00000384407 104 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 MIR19A-201ENST00000384878 82 ntBASIC2.03□□□□□ -2.08
HLA-DQA1P01909 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms