Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.77□□□□□ -1.97
MBD3O95983 RNU6-1256P-201ENST00000516539 103 ntBASIC2.77□□□□□ -1.97
MBD3O95983 NRON-201ENST00000517270 370 ntBASIC2.77□□□□□ -1.97
MBD3O95983 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
MBD3O95983 MIR3944-201ENST00000581277 108 ntBASIC2.77□□□□□ -1.97
MBD3O95983 MIR4444-1-201ENST00000581696 74 ntBASIC2.77□□□□□ -1.97
MBD3O95983 MIR4444-2-201ENST00000584390 74 ntBASIC2.77□□□□□ -1.97
MBD3O95983 AC010620.2-201ENST00000600135 313 ntBASIC2.77□□□□□ -1.97
MBD3O95983 VN1R82P-201ENST00000601481 356 ntBASIC2.77□□□□□ -1.97
MBD3O95983 AC080013.3-201ENST00000606839 578 ntBASIC2.77□□□□□ -1.97
MBD3O95983 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.77□□□□□ -1.97
MBD3O95983 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.77□□□□□ -1.97
MBD3O95983 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.77□□□□□ -1.97
MBD3O95983 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.77□□□□□ -1.97
MBD3O95983 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
MBD3O95983 ZNF720P1-201ENST00000562403 1939 ntBASIC2.76□□□□□ -1.97
MBD3O95983 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
MBD3O95983 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
MBD3O95983 MIRLET7G-201ENST00000362280 84 ntBASIC2.76□□□□□ -1.97
MBD3O95983 RNU1-138P-201ENST00000384093 164 ntBASIC2.76□□□□□ -1.97
MBD3O95983 RNU6-906P-201ENST00000384700 70 ntBASIC2.76□□□□□ -1.97
MBD3O95983 RPS3AP25-201ENST00000411660 793 ntBASIC2.76□□□□□ -1.97
MBD3O95983 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.76□□□□□ -1.97
MBD3O95983 Z82210.1-201ENST00000440037 231 ntBASIC2.76□□□□□ -1.97
MBD3O95983 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 RSL24D1P3-201ENST00000449255 495 ntBASIC2.76□□□□□ -1.97
MBD3O95983 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.76□□□□□ -1.97
MBD3O95983 snoU13.28-201ENST00000459235 104 ntBASIC2.76□□□□□ -1.97
MBD3O95983 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
MBD3O95983 TTC39CP1-201ENST00000512513 755 ntBASIC2.76□□□□□ -1.97
MBD3O95983 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.76□□□□□ -1.97
MBD3O95983 ATP5F1P5-201ENST00000526403 760 ntBASIC2.76□□□□□ -1.97
MBD3O95983 AC022080.3-201ENST00000544433 482 ntBASIC2.76□□□□□ -1.97
MBD3O95983 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.76□□□□□ -1.97
MBD3O95983 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.76□□□□□ -1.97
MBD3O95983 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.76□□□□□ -1.97
MBD3O95983 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.76□□□□□ -1.97
MBD3O95983 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.76□□□□□ -1.97
MBD3O95983 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.76□□□□□ -1.97
MBD3O95983 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
MBD3O95983 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
MBD3O95983 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MBD3O95983 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
MBD3O95983 RNU6-217P-201ENST00000384164 104 ntBASIC2.75□□□□□ -1.97
MBD3O95983 MIR27B-201ENST00000385129 97 ntBASIC2.75□□□□□ -1.97
MBD3O95983 MTCO2P23-201ENST00000425216 680 ntBASIC2.75□□□□□ -1.97
MBD3O95983 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3O95983 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.75□□□□□ -1.97
MBD3O95983 AC104389.3-201ENST00000445629 235 ntBASIC2.75□□□□□ -1.97
MBD3O95983 PTENP1-201ENST00000447117 1215 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3O95983 DUXAP8-207ENST00000456786 622 ntBASIC2.75□□□□□ -1.97
MBD3O95983 RPL23AP45-201ENST00000476406 468 ntBASIC2.75□□□□□ -1.97
MBD3O95983 RPL36AP51-201ENST00000487216 318 ntBASIC2.75□□□□□ -1.97
MBD3O95983 HMGB1P36-201ENST00000487709 576 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AIG1P1-201ENST00000503376 148 ntBASIC2.75□□□□□ -1.97
MBD3O95983 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3O95983 AP002748.2-201ENST00000528671 348 ntBASIC2.75□□□□□ -1.97
MBD3O95983 HSPE1P20-201ENST00000538133 289 ntBASIC2.75□□□□□ -1.97
MBD3O95983 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3O95983 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.75□□□□□ -1.97
MBD3O95983 MIR3908-201ENST00000579798 126 ntBASIC2.75□□□□□ -1.97
MBD3O95983 VN1R92P-201ENST00000598511 928 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AL391001.1-201ENST00000602747 715 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AL136363.1-201ENST00000605349 337 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC093732.2-201ENST00000607950 274 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC084757.4-201ENST00000616350 526 ntBASIC2.75□□□□□ -1.97
MBD3O95983 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.75□□□□□ -1.97
MBD3O95983 MIR6075-201ENST00000620782 95 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC244100.1-202ENST00000621554 382 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
MBD3O95983 PCMTD1P7-201ENST00000634506 357 ntBASIC2.75□□□□□ -1.97
MBD3O95983 FO624990.1-201ENST00000636373 85 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC006927.4-201ENST00000639187 543 ntBASIC2.75□□□□□ -1.97
MBD3O95983 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
MBD3O95983 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
MBD3O95983 MTND5P1-201ENST00000445440 1375 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
MBD3O95983 RNU1-105P-201ENST00000363470 161 ntBASIC2.74□□□□□ -1.97
MBD3O95983 RNU6-289P-201ENST00000364093 107 ntBASIC2.74□□□□□ -1.97
MBD3O95983 MIR1305-201ENST00000408300 86 ntBASIC2.74□□□□□ -1.97
MBD3O95983 MIR320C1-201ENST00000408566 88 ntBASIC2.74□□□□□ -1.97
MBD3O95983 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.74□□□□□ -1.97
MBD3O95983 MTCO1P17-201ENST00000411522 491 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AL513331.1-201ENST00000411908 397 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
MBD3O95983 AL451062.2-201ENST00000427515 271 ntBASIC2.74□□□□□ -1.97
MBD3O95983 ARPC3P1-201ENST00000437218 533 ntBASIC2.74□□□□□ -1.97
MBD3O95983 MTND3P1-201ENST00000441336 220 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AC009296.1-201ENST00000443146 155 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.74□□□□□ -1.97
MBD3O95983 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.74□□□□□ -1.97
MBD3O95983 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.74□□□□□ -1.97
MBD3O95983 BX510359.1-201ENST00000456973 237 ntBASIC2.74□□□□□ -1.97
MBD3O95983 AP1S2P1-201ENST00000457344 379 ntBASIC2.74□□□□□ -1.97
MBD3O95983 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms