Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 SNORA46-201ENST00000384762 135 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AL109755.1-201ENST00000401791 649 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AL354719.1-201ENST00000406535 843 ntBASIC3.71□□□□□ -1.82
DDX58O95786 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
DDX58O95786 RPL7P8-201ENST00000411964 730 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX58O95786 OR2AS1P-201ENST00000427827 319 ntBASIC3.71□□□□□ -1.82
DDX58O95786 RPS20P5-201ENST00000434808 360 ntBASIC3.71□□□□□ -1.82
DDX58O95786 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX58O95786 KATNBL1P6-201ENST00000453433 915 ntBASIC3.71□□□□□ -1.82
DDX58O95786 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX58O95786 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX58O95786 RPL23AP41-201ENST00000484754 458 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC114967.1-201ENST00000504890 259 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC006445.2-201ENST00000510061 472 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX58O95786 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX58O95786 AC135628.1-201ENST00000568867 534 ntBASIC3.71□□□□□ -1.82
DDX58O95786 ROCK1P1-201ENST00000573767 549 ntBASIC3.71□□□□□ -1.82
DDX58O95786 OR10AB1P-201ENST00000609613 938 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC103710.1-201ENST00000610003 901 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC010133.1-201ENST00000615809 842 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC027309.3-201ENST00000623419 351 ntBASIC3.71□□□□□ -1.82
DDX58O95786 AC093591.3-201ENST00000634516 308 ntBASIC3.71□□□□□ -1.82
DDX58O95786 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX58O95786 AL365361.1-201ENST00000566942 3481 ntBASIC3.71□□□□□ -1.82
DDX58O95786 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX58O95786 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
DDX58O95786 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX58O95786 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX58O95786 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX58O95786 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX58O95786 CCNG1P1-201ENST00000406783 885 ntBASIC3.7□□□□□ -1.82
DDX58O95786 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX58O95786 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX58O95786 AL390023.1-201ENST00000428836 262 ntBASIC3.7□□□□□ -1.82
DDX58O95786 RPL22P17-201ENST00000438729 315 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AL135938.1-201ENST00000443141 297 ntBASIC3.7□□□□□ -1.82
DDX58O95786 ELOCP30-201ENST00000447108 299 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX58O95786 RNU7-59P-201ENST00000459101 61 ntBASIC3.7□□□□□ -1.82
DDX58O95786 RPL30P5-201ENST00000494923 336 ntBASIC3.7□□□□□ -1.82
DDX58O95786 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.7□□□□□ -1.82
DDX58O95786 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX58O95786 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX58O95786 SNORA31.1-201ENST00000515993 133 ntBASIC3.7□□□□□ -1.82
DDX58O95786 SNORA31.5-201ENST00000516190 133 ntBASIC3.7□□□□□ -1.82
DDX58O95786 SCARNA15.2-201ENST00000516409 127 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AC106038.2-201ENST00000520706 568 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AP000857.1-201ENST00000532151 543 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX58O95786 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX58O95786 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX58O95786 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX58O95786 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX58O95786 Z99497.2-201ENST00000603634 310 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AC013476.2-201ENST00000614456 459 ntBASIC3.7□□□□□ -1.82
DDX58O95786 AC022079.1-201ENST00000621546 602 ntBASIC3.7□□□□□ -1.82
DDX58O95786 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX58O95786 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX58O95786 RNU1-39P-201ENST00000383897 165 ntBASIC3.69□□□□□ -1.82
DDX58O95786 SNORD116-8-201ENST00000384365 95 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AL645937.1-202ENST00000421799 937 ntBASIC3.69□□□□□ -1.82
DDX58O95786 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX58O95786 NDUFB4P7-201ENST00000423198 363 ntBASIC3.69□□□□□ -1.82
DDX58O95786 USP9YP36-201ENST00000424581 829 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AC093156.1-201ENST00000440382 670 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AC125238.1-201ENST00000448842 249 ntBASIC3.69□□□□□ -1.82
DDX58O95786 UQCRHP3-201ENST00000451503 251 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX58O95786 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 OR5BM1P-201ENST00000512021 366 ntBASIC3.69□□□□□ -1.82
DDX58O95786 RNA5SP367-201ENST00000516557 118 ntBASIC3.69□□□□□ -1.82
DDX58O95786 SNORD59.2-201ENST00000516873 68 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AC025881.1-201ENST00000518851 512 ntBASIC3.69□□□□□ -1.82
DDX58O95786 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.69□□□□□ -1.82
DDX58O95786 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX58O95786 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
DDX58O95786 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 AC022146.1-201ENST00000595307 847 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AP000403.1-201ENST00000603349 851 ntBASIC3.69□□□□□ -1.82
DDX58O95786 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX58O95786 AC090970.3-201ENST00000612566 866 ntBASIC3.69□□□□□ -1.82
DDX58O95786 SDR42E1P2-201ENST00000614861 481 ntBASIC3.69□□□□□ -1.82
DDX58O95786 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX58O95786 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DDX58O95786 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
DDX58O95786 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX58O95786 Y_RNA.97-201ENST00000363094 102 ntBASIC3.68□□□□□ -1.82
DDX58O95786 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
DDX58O95786 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
DDX58O95786 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
DDX58O95786 RPL21P24-201ENST00000413752 448 ntBASIC3.68□□□□□ -1.82
DDX58O95786 Z99497.1-201ENST00000421282 135 ntBASIC3.68□□□□□ -1.82
DDX58O95786 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX58O95786 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
DDX58O95786 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms