Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC084290.1-201ENST00000434995 374 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC092427.1-201ENST00000439177 601 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 MTND2P20-201ENST00000440805 661 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTDNEP1O95476 USP9YP8-201ENST00000441913 500 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 MTCYBP11-201ENST00000447254 1109 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 RPL21P134-201ENST00000453468 483 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 RPS15AP17-201ENST00000470598 390 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 SETP11-201ENST00000473027 690 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 TMEM251P1-201ENST00000503717 318 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC079395.1-201ENST00000510981 262 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 RAC1P5-201ENST00000512182 576 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 RNU6-27P-201ENST00000516146 107 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 U73023.1-201ENST00000603134 700 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC107952.2-201ENST00000606048 486 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC034102.8-201ENST00000615146 484 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDNEP1O95476 AL356266.1-201ENST00000623311 483 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC091925.2-201ENST00000625059 256 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 AC116618.1-201ENST00000634617 774 ntBASIC2.45□□□□□ -2.02
CTDNEP1O95476 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTDNEP1O95476 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CTDNEP1O95476 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CTDNEP1O95476 Y_RNA.111-201ENST00000363248 100 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 Y_RNA.465-201ENST00000384293 102 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 RNU6-83P-201ENST00000384568 112 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC092447.6-201ENST00000414578 210 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 CR769776.1-201ENST00000441254 787 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 MTCO3P11-201ENST00000455103 774 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC104090.1-201ENST00000506341 1171 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC116353.3-201ENST00000511215 249 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC008549.1-201ENST00000512900 643 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 MTCO2P15-201ENST00000532655 656 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC012669.1-201ENST00000603209 283 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AC055876.5-201ENST00000605667 259 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 AL161734.1-201ENST00000609720 557 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 SNHG22-203ENST00000617833 660 ntBASIC2.44□□□□□ -2.02
CTDNEP1O95476 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.44□□□□□ -2.02
CTDNEP1O95476 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CTDNEP1O95476 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CTDNEP1O95476 AL513185.3-201ENST00000433335 1300 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RNU1-73P-201ENST00000383971 164 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 SNORA64-201ENST00000384674 134 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RPL23AP29-201ENST00000397284 453 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTDNEP1O95476 RNU2-2P-201ENST00000410396 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 USP9YP27-201ENST00000418455 438 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 OR6K5P-201ENST00000447050 945 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 MTCO2P25-201ENST00000447065 681 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC005297.2-201ENST00000450430 606 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC026410.2-201ENST00000460281 156 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC006499.2-201ENST00000513470 337 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RNU6-583P-201ENST00000516012 92 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RNU6-311P-201ENST00000516224 102 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 RN7SKP40-201ENST00000517211 242 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 MRPS36P3-201ENST00000519284 130 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 MTND4P33-201ENST00000556706 766 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.43□□□□□ -2.02
CTDNEP1O95476 MED28P6-201ENST00000558776 231 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 SNORD53-201ENST00000579969 78 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 MIR4637-201ENST00000582405 84 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 AC024560.3-201ENST00000608482 349 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.15-201ENST00000611544 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.16-201ENST00000613119 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.12-201ENST00000613778 191 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.20-201ENST00000613956 192 ntBASIC2.43□□□□□ -2.02
CTDNEP1O95476 U2.9-201ENST00000615427 191 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms