Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP4O75161 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP4O75161 Z98749.2-208ENST00000381646 500 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 RNU6-932P-201ENST00000391108 106 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 U3.29-201ENST00000391296 212 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AP002784.2-201ENST00000397300 549 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 RPL21P1-201ENST00000399532 476 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AL121978.1-201ENST00000402778 359 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AL139098.1-201ENST00000407291 389 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 RNU4-65P-201ENST00000410473 140 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 RPL23AP39-201ENST00000415533 405 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP4O75161 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP4O75161 AC002542.1-201ENST00000440683 193 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 MTCO3P2-201ENST00000457365 171 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 RPL32P14-201ENST00000463196 378 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AC055855.1-201ENST00000489563 579 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AC079804.2-201ENST00000490376 200 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP4O75161 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP4O75161 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP4O75161 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP4O75161 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP4O75161 SNORA31.8-201ENST00000516327 108 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 ZNF705CP-201ENST00000530515 889 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AC006518.2-201ENST00000542513 940 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP4O75161 AL360181.4-201ENST00000621752 134 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP4O75161 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP4O75161 CKAP2P1-201ENST00000555477 2049 ntBASIC2.52□□□□□ -2.01
NPHP4O75161 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP4O75161 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NPHP4O75161 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 RNA5SP338-201ENST00000410495 85 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.51□□□□□ -2.01
NPHP4O75161 RPL23AP7-203ENST00000449021 469 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC078857.1-201ENST00000469870 667 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 MTCYBP17-201ENST00000503579 789 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC118282.2-201ENST00000508739 374 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 COL6A4P2-205ENST00000509855 506 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 OR8K2P-201ENST00000524645 927 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 VIS1.1-201ENST00000610517 203 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NPHP4O75161 AL359740.1-201ENST00000624340 592 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC091925.2-201ENST00000625059 256 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP4O75161 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.51□□□□□ -2.01
NPHP4O75161 SGO1P2-201ENST00000429458 1589 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP4O75161 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP4O75161 RNU6-657P-201ENST00000383904 107 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 SNORA51.6-201ENST00000384151 125 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC016769.3-201ENST00000396562 315 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 MTCO2P31-201ENST00000402702 684 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 AL050341.1-201ENST00000447743 313 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPHP4O75161 AIG1P1-201ENST00000503376 148 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC105914.1-201ENST00000511798 226 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.51□□□□□ -2.01
NPHP4O75161 FAM60BP-201ENST00000578364 658 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 SNORD84-203ENST00000584275 78 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AL645939.4-201ENST00000604495 135 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 AC002487.1-201ENST00000604565 994 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 SNHG22-203ENST00000617833 660 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP4O75161 AC091948.2-201ENST00000636510 279 ntBASIC2.51□□□□□ -2.01
NPHP4O75161 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
NPHP4O75161 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP4O75161 AC103988.1-201ENST00000566382 2177 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP4O75161 RNA5SP160-201ENST00000364866 120 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPHP4O75161 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NPHP4O75161 AL158053.1-201ENST00000441503 453 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 COX6CP18-201ENST00000448769 222 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.5□□□□□ -2.01
NPHP4O75161 RNA5SP310-201ENST00000459084 116 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 RAC1P5-201ENST00000512182 576 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 RNU6-334P-201ENST00000517072 102 ntBASIC2.5□□□□□ -2.01
NPHP4O75161 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.5□□□□□ -2.01
NPHP4O75161 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.5□□□□□ -2.01
NPHP4O75161 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms